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The map label for this gene is yibJ [H]

Identifier: 218930619

GI number: 218930619

Start: 4023133

End: 4024503

Strand: Direct

Name: yibJ [H]

Synonym: YPO3609

Alternate gene names: 218930619

Gene position: 4023133-4024503 (Clockwise)

Preceding gene: 218930618

Following gene: 218930620

Centisome position: 86.45

GC content: 52.15

Gene sequence:

>1371_bases
GTGGCGGCCGATCTGCTGCCCCGTCAGGGGGATATCTGGCGTAAATTTAGCTTTGACACTGCCGGTGAACTGAGCATGGC
CACCGATTTTATCCGGGGTGAGCAGCAGTACCGTTATGATGCGGAAGGGCGGCTGACTGACAGCCGGGAGCGTCATCAGT
TATCCGTTGCGGAGGATTTTGCTTACGACAATGCGGATAACCTGCTGAACCTGAGGAAACTGCCGTTTGATACGGTCGAT
CCACTGTACGATACACCGGTCGCCAACAACCGTTTGACGCAATGGCAGCATTACCGTTTTGAGTATGATGCCTGGGGAAA
CATGACCACGCGGCATGCCGGTGGTCGGATGCAACATTTTGCCTATGACGATGATAACCGGCTGCTGCGGGCCTGGGGAA
CCGGGCCGTTAGGGGAGCATGACAGCCACTATCGGTATGATGCGCTGGGGCGGCGTATCCACAAATCGGTGACGATAAAG
CGCGGCGCAGAAAAAACCACCCGTCAGACCGATTTTATCTGGCAGGGACTGCGGTTGTTGCAGGAGCAACATACGGACGG
CAACGCGACCTATATTTACGACCCGAACGAAAGTTATACGCCGCTGGCGCGGGTCGATCAGCGTCATGGCGAGACAGAAA
GTCAGGTGTATTATTTTCATACGGATATCAACGGTACCCCGCTGGATGTCACGGACGGAGAGGGTAAGCACCGCTGGTCA
GGGAAATACCACGCCTGGGGCAAAGTCACCCGGCAGAATGTCAGCGATCCAAGGCAAAGCACGGTCAGCCGGTTCGCGCA
ACCGCTGCGTTATCCGGGGCAATACAGTGATGACGAGACGGGTTTGCACTACAATACGTTCAGGTACTATGACCCGGAGA
TAGGGCGATTTAGTACGCAGGACCCGATAGGGCTGGCGGGGGGGATAAATCTTTATCAGTATGGGCCAAATCCGTTAACG
TGGATCGATCCTTGGGGATGGGCTTTTGGGGGCGTTGACTTTACTGGATCTCCAGATTTATTCCCTGTCAAAGGGAGCCA
GTTAAATATTGTAGAAATAACAATGCAAGGTGCCCGAGGACGAGATTTCACGGAGGCATTTAAACTGGCTGGTATATCAA
AAGCAGACGCCACTGGTTATACATGGCACCATTTAAATGATTTCGATCCTGTAAGTGGTAAAACAACCATGCAATTGGTA
ACAACATCAGCTCACGAAGCTACATTCCCTCATGCGGGTTCAGTTTCTCAATTTGAAAAGCACTTTAATTTACCTTCTCA
GTCTTATGGCAGTGCAGATGCTGTTGCTATATCGCATTCGAAAGGTTGGTTAAAGGGCCGAATTCCTAAGGCGCTAAGGT
CGGGGTGTTAA

Upstream 100 bases:

>100_bases
TCGGGAAGTGAGCCGGACCCAGGGTATTTTGACGCAGTATCGTGATTATGACGCGATGGGGCGGCGGTTGTAGCAATCGG
CGGGTTCTGATGCGCCGACA

Downstream 100 bases:

>100_bases
AATGAAAAATCCTTGTCAGAATTGTGAGAAGAATATCGATTTGTCAGATATTAAATCTGTAGAGAAAACTTTAGGTTATT
CTTTCCCTGAAGCGTTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MAADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDFAYDNADNLLNLRKLPFDTVD
PLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQHFAYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIK
RGAEKTTRQTDFIWQGLRLLQEQHTDGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKHRWS
GKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQDPIGLAGGINLYQYGPNPLT
WIDPWGWAFGGVDFTGSPDLFPVKGSQLNIVEITMQGARGRDFTEAFKLAGISKADATGYTWHHLNDFDPVSGKTTMQLV
TTSAHEATFPHAGSVSQFEKHFNLPSQSYGSADAVAISHSKGWLKGRIPKALRSGC

Sequences:

>Translated_456_residues
MAADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDFAYDNADNLLNLRKLPFDTVD
PLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQHFAYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIK
RGAEKTTRQTDFIWQGLRLLQEQHTDGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKHRWS
GKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQDPIGLAGGINLYQYGPNPLT
WIDPWGWAFGGVDFTGSPDLFPVKGSQLNIVEITMQGARGRDFTEAFKLAGISKADATGYTWHHLNDFDPVSGKTTMQLV
TTSAHEATFPHAGSVSQFEKHFNLPSQSYGSADAVAISHSKGWLKGRIPKALRSGC
>Mature_455_residues
AADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDFAYDNADNLLNLRKLPFDTVDP
LYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQHFAYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIKR
GAEKTTRQTDFIWQGLRLLQEQHTDGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKHRWSG
KYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQDPIGLAGGINLYQYGPNPLTW
IDPWGWAFGGVDFTGSPDLFPVKGSQLNIVEITMQGARGRDFTEAFKLAGISKADATGYTWHHLNDFDPVSGKTTMQLVT
TSAHEATFPHAGSVSQFEKHFNLPSQSYGSADAVAISHSKGWLKGRIPKALRSGC

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1790020, Length=112, Percent_Identity=45.5357142857143, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1786706, Length=190, Percent_Identity=35.2631578947368, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI48994942, Length=115, Percent_Identity=44.3478260869565, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1786917, Length=137, Percent_Identity=40.1459854014599, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385 [H]

Pfam domain/function: PF03527 RHS [H]

EC number: NA

Molecular weight: Translated: 51902; Mature: 51770

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDF
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCHHHHEEHHHHHH
AYDNADNLLNLRKLPFDTVDPLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQHF
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEE
AYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIKRGAEKTTRQTDFIWQGLRLL
EECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
QEQHTDGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKHRWS
HHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCEEC
GKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQ
CCEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
DPIGLAGGINLYQYGPNPLTWIDPWGWAFGGVDFTGSPDLFPVKGSQLNIVEITMQGARG
CCCCEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCC
RDFTEAFKLAGISKADATGYTWHHLNDFDPVSGKTTMQLVTTSAHEATFPHAGSVSQFEK
CCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHH
HFNLPSQSYGSADAVAISHSKGWLKGRIPKALRSGC
HCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
AADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDF
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCHHHHEEHHHHHH
AYDNADNLLNLRKLPFDTVDPLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQHF
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEE
AYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIKRGAEKTTRQTDFIWQGLRLL
EECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
QEQHTDGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKHRWS
HHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCEEC
GKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQ
CCEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
DPIGLAGGINLYQYGPNPLTWIDPWGWAFGGVDFTGSPDLFPVKGSQLNIVEITMQGARG
CCCCEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCC
RDFTEAFKLAGISKADATGYTWHHLNDFDPVSGKTTMQLVTTSAHEATFPHAGSVSQFEK
CCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHH
HFNLPSQSYGSADAVAISHSKGWLKGRIPKALRSGC
HCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503 [H]