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The map label for this gene is 218930612

Identifier: 218930612

GI number: 218930612

Start: 4010961

End: 4012358

Strand: Direct

Name: 218930612

Synonym: YPO3602

Alternate gene names: NA

Gene position: 4010961-4012358 (Clockwise)

Preceding gene: 218930611

Following gene: 218930613

Centisome position: 86.19

GC content: 53.65

Gene sequence:

>1398_bases
GTGAGGCATATGGATATCACGTCACAACATCCCTGGCATGTCTTGTTACAAGCCCCTTTGTCACCTGAGCAGACCGCACA
AGCCCTGGCCGATGATGACCCCCAATGGGAATATATCGACGGCCAGATGGTGAAACTGGGGTCATTGGCCCACGCCACGC
TGAATATTGATGATATTCAGCAACAAGCCATGGCGCTGTTATCACAGAAAAGTAAAGACTTCCGGCTCGTGGTGCATCTA
CTGCGCACCCTACAACACGGGGGCCAGCCAGATGAATTAATGCTGGCGATGTCGTTGCTGACCGAATACGTCCAGCTATT
TTGGACTACGGCCTGGCCGCAAAATCCTTTACACAAACGGCGCTTTGCTCAACAAATCCTAAAACGCTTTGACAGCGCCA
GCAGCAGTTTTAGCCAACGAGCGGACGAGGCTCAACGTGAGAATGTGCAAGGATTATTGGCACATTTAGCACAGGTTTGG
CATAGCCGTGAGCCGGGTCTGGCTAAAGAGGTGGATGCATTACGCAGCCGCTATGCGCGGCCACCGGAGCGGGTTATCGA
GGCAGTGGCTTCTGATGAACCGCTCTCATCCAACACCTTGGCGGCGGCAATGGCCGCCACCCCCGTTAGCCCAAGCCTCG
CCATAGATAACACGAGCGACAGAGCCTGGCGGCAGACCTTGCTGAAAATGGCGGATCTACTCAGCGAACAGCAACCCGAT
GCCGCTATCGGTTTCCGGCTACGCCGCCATGCCGTATGGGGCGCGTTAACCGCACCACCTATGGCGCAGAGCGATGGCCG
CACCCCGTTAGCCGCGGTATCTGCGGATCGAACCGCCGATTACTTAGCACGTCTGGCTAATGCCGATTTGCCTTTGTGGC
ACCAAGTGGAGCAGAGCCTCACCCTCGCGCCTTATTGGCTGGATGGACATGTGCTTTCGGCACAAATCGCCCTGCAACTG
GGTTATGACGCGGTGGCACAGGCTATCCGTGATGAACTCAGCGTTTTTTTAGCCCGTATTCCCGCATTAAAAACCCTCTT
TTTTACGGATATGACGCCATTCCTCTCCTCTGAATCTGCCGCCTGGTTACAGCAGGATGCGAATCATCAGGGAAGAAGTC
GCACTATTGAACAGGATGAAATTTGGCAATGCTATCAACAGCAAGGATTGGAAGCCGCACTACAGATGATAAACCGGCAA
CCACAGCAATCCGAACCTCGGGACCGTTTTTACCATCAATTGCTCAGTGCACAGTTGTTCGAAAAAGCAGGGTTAACCGC
ATTGGCGCAGCAGCACTACCACAGCTTATTACTGGTAGGGCAGCAATTACAGCTAAGCGAATGGGAACCTGCGTTGATCG
CTCTACTGACAGAAAAACAGCGACAACTCAAACCATGA

Upstream 100 bases:

>100_bases
CCCTGACCATCGAAGGGGCAAACGGTGCTTTTCCTCGGCTGACATTTACTCTTTCTCAGTTAACGCCAGCGTTGAAACCG
CTGCGTAACGCATGTCATTG

Downstream 100 bases:

>100_bases
TCGCCATGGAATGCCACAGGAGCGTTAGCGCATGAAATTGCCGTTCTTTATACGCATAGCCAAGCCCGCCATTCCTCGCC
TTAAAGCGTCAATACCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Protein ImpA; Type VI Secretion-Associated Protein Family; ImpA Domain Protein; Type VI Secretion Protein VasJ; ImpA-Related Domain-Containing Protein

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLVVHL
LRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVW
HSREPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQPD
AAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIALQL
GYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQ
PQQSEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP

Sequences:

>Translated_465_residues
MRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLVVHL
LRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVW
HSREPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQPD
AAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIALQL
GYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQ
PQQSEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP
>Mature_465_residues
MRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLVVHL
LRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVW
HSREPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQPD
AAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIALQL
GYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQ
PQQSEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52359; Mature: 52359

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQ
CCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHCCCHHHHH
QQAMALLSQKSKDFRLVVHLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKR
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVWHSREPGLAKEVDALRSRYAR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQPD
CHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
AAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHCCCCCHHHHHHHCC
TLAPYWLDGHVLSAQIALQLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESA
CCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHH
AWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQPQQSEPRDRFYHQLLSAQLF
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRHMDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQ
CCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHCCCHHHHH
QQAMALLSQKSKDFRLVVHLLRTLQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKR
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVWHSREPGLAKEVDALRSRYAR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQPD
CHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
AAIGFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHCCCCCHHHHHHHCC
TLAPYWLDGHVLSAQIALQLGYDAVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESA
CCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHH
AWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQPQQSEPRDRFYHQLLSAQLF
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA