| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930610
Identifier: 218930610
GI number: 218930610
Start: 4009484
End: 4010281
Strand: Direct
Name: 218930610
Synonym: YPO3600
Alternate gene names: NA
Gene position: 4009484-4010281 (Clockwise)
Preceding gene: 218930609
Following gene: 218930611
Centisome position: 86.16
GC content: 50.25
Gene sequence:
>798_bases ATGAGACAACGGTTAAAGAGTGTCCTCGCACTGCTGGACAATGACTCAACCGAACAACTGATCCATCGCTTTCTGACGAT TAACCACCACCGCCAACGATTTAGCGCCCTGATGGTGTCGATGTTTAACGCCAGTGAAGGGCGTCTTGATTGTTATCACC AGCCGGATGGCGGCATGAACGTTGCGTTGAAGCTGGATGCGAATATTGAAGATGTTAACCATCCGTTGGTTCGGGTTTTG CGCAATGGTTTCCCCGAAGTGTGGGGCAGCCTGTATCAGGGGGTACGCATCGAAGATGATGATTTTCGCAGCTTCATTCA GGCGTTACCCACGAGGTGTGGGCTGTACGCCTTACCGCTGTTTGACGTTCATGGACATGCCTGCGGCGTGATTGCGGTTT TTTCCGAAAATATCGAACGCTTCGCTGATACTCGCGGCATATTTAGTATTTATTGCCACATCTTTCAGCATCGCCTGAAC AAATTACAGGAGATGGACCAACTGAGATCGCAATTTAATCAGATCCGAACGGTATTTAAAGAGCAGCGACAGCGGGAAAA GCAATTAGATGAGTTATTGGTCTCGCTCAGTACCTCAGATACGCACGCCTTGCCCGGAATCTCTCAAGACTACAGCAAAA TAGACAGCCTGACCACGGCGGTCGAGACCTTCGAATGTGCTGTATTGACCCAGCGCCAGCGCCTGTACGGTAACGACAAA AGCCGTATTGCGGCCAGTTTGGGGCTATCACTGCGCGCCTTGACGTATAAGTTAGCGAAATACAGGTGCCAGCTATGA
Upstream 100 bases:
>100_bases CTCTGTTGTTATTACAGAAAGTGGCCGCTGGCACCGCTATCAGCCACATTCGGATCGCGGTAGAGGGGAATGTGTTTACT GCACAGGTTGAGGGAGCGAT
Downstream 100 bases:
>100_bases ACACGTGGTTATTGATTAGCTCGTTACTGTTTTCCGGCGGCCATACCGACGCTTTTTGGACGATGGGATTACCCCCCCCG GTGGCGGAAAAAGAGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMNVALKLDANIEDVNHPLVRVL RNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLN KLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK SRIAASLGLSLRALTYKLAKYRCQL
Sequences:
>Translated_265_residues MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMNVALKLDANIEDVNHPLVRVL RNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLN KLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK SRIAASLGLSLRALTYKLAKYRCQL >Mature_265_residues MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMNVALKLDANIEDVNHPLVRVL RNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLN KLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK SRIAASLGLSLRALTYKLAKYRCQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30478; Mature: 30478
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMN CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE VALKLDANIEDVNHPLVRVLRNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPL EEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECH FDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLNKLQEMDQLRSQFNQIRTVFK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SRIAASLGLSLRALTYKLAKYRCQL HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMN CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE VALKLDANIEDVNHPLVRVLRNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPL EEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECH FDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLNKLQEMDQLRSQFNQIRTVFK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SRIAASLGLSLRALTYKLAKYRCQL HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA