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The map label for this gene is elbB [H]

Identifier: 218930565

GI number: 218930565

Start: 3961893

End: 3962546

Strand: Reverse

Name: elbB [H]

Synonym: YPO3553

Alternate gene names: 218930565

Gene position: 3962546-3961893 (Counterclockwise)

Preceding gene: 218930566

Following gene: 218930564

Centisome position: 85.15

GC content: 45.72

Gene sequence:

>654_bases
ATGAAAACAGTTGGCGTAGTGCTCAGTGGATGTGGTGTTTTGGATGGCGCTGAAATCCATGAGTCTGTCTTAACAATGCT
GGCATTGGATCGCGCGGGCGCAGAGGTTTTGTTTTTTGCGCCAGATAAACCTCAACTTCATGTTATTAATCATATTACTG
GTGAGATTGTTGCAGAAGAACGGAACGTTTTAGTGGAGTCTGCCCGCATTGCCCGTGGCCTGATCACCCCCCTTTCTGCG
GCTGATCCAGAGGTATTAGATGCACTAATCGTACCGGGAGGTTTTGGGGCAGCAAAGAACCTCTGCGACTTCGCCATTAA
AGGGGGCGAATGTTCCGTTGAACCCGATTTATATAAGTTAATTCAATTAATGCATAAGTCCGGTAAACCAATTGGATTGA
TGTGTATTTCTCCGGTGATGCTGCCGAAGCTGTTGGGCAAACCCATTCGACTGACAATTGGTAACGATCCCGATACGATT
GATGCCATTGAAATTATGGGGGGGGAGCATGTTATTTGCCCTGCTGATGACGTTGTCATTGATTTGGAAAATAAAGTGGT
GACGACACCGGCTTACATGTTGGCTGGTTCCATTTCAGAAGCGGCTAAAGGTATTGATAAATTGGTGACGAAAGTCTTGG
ATTTAACTGAATGA

Upstream 100 bases:

>100_bases
GCGCTCTTGTTACAAGATTCATTAAAATTTGTGATAGAGATTGGTCTTTGTTACTAGAACGGGTTAAGTGATTGACAGAG
GAAGATAAGGGAGAAACGAG

Downstream 100 bases:

>100_bases
TCTCAGTCAGACGGGGGTTTAGTCAGCTTTGGTATTGGGGGAAACGGGGGGTTATCGGCATTATTGCGCTGTGGATGGCC
GGTATTCTGATTTTTGCTTT

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKTVGVVLSGCGVLDGAEIHESVLTMLALDRAGAEVLFFAPDKPQLHVINHITGEIVAEERNVLVESARIARGLITPLSA
ADPEVLDALIVPGGFGAAKNLCDFAIKGGECSVEPDLYKLIQLMHKSGKPIGLMCISPVMLPKLLGKPIRLTIGNDPDTI
DAIEIMGGEHVICPADDVVIDLENKVVTTPAYMLAGSISEAAKGIDKLVTKVLDLTE

Sequences:

>Translated_217_residues
MKTVGVVLSGCGVLDGAEIHESVLTMLALDRAGAEVLFFAPDKPQLHVINHITGEIVAEERNVLVESARIARGLITPLSA
ADPEVLDALIVPGGFGAAKNLCDFAIKGGECSVEPDLYKLIQLMHKSGKPIGLMCISPVMLPKLLGKPIRLTIGNDPDTI
DAIEIMGGEHVICPADDVVIDLENKVVTTPAYMLAGSISEAAKGIDKLVTKVLDLTE
>Mature_217_residues
MKTVGVVLSGCGVLDGAEIHESVLTMLALDRAGAEVLFFAPDKPQLHVINHITGEIVAEERNVLVESARIARGLITPLSA
ADPEVLDALIVPGGFGAAKNLCDFAIKGGECSVEPDLYKLIQLMHKSGKPIGLMCISPVMLPKLLGKPIRLTIGNDPDTI
DAIEIMGGEHVICPADDVVIDLENKVVTTPAYMLAGSISEAAKGIDKLVTKVLDLTE

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=46.1883408071749, Blast_Score=194, Evalue=4e-50,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=41.2556053811659, Blast_Score=150, Evalue=1e-36,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=63.594470046083, Blast_Score=289, Evalue=8e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22897; Mature: 22897

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVGVVLSGCGVLDGAEIHESVLTMLALDRAGAEVLFFAPDKPQLHVINHITGEIVAEE
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHHHHHHHH
RNVLVESARIARGLITPLSAADPEVLDALIVPGGFGAAKNLCDFAIKGGECSVEPDLYKL
HHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCHHHHHHHHEECCCCCCCCHHHHHH
IQLMHKSGKPIGLMCISPVMLPKLLGKPIRLTIGNDPDTIDAIEIMGGEHVICPADDVVI
HHHHHHCCCCEEEEECCHHHHHHHCCCCEEEEECCCCCCCHHEEECCCCEEEECCCCEEE
DLENKVVTTPAYMLAGSISEAAKGIDKLVTKVLDLTE
EECCCEECCCHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTVGVVLSGCGVLDGAEIHESVLTMLALDRAGAEVLFFAPDKPQLHVINHITGEIVAEE
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHHHHHHHH
RNVLVESARIARGLITPLSAADPEVLDALIVPGGFGAAKNLCDFAIKGGECSVEPDLYKL
HHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCHHHHHHHHEECCCCCCCCHHHHHH
IQLMHKSGKPIGLMCISPVMLPKLLGKPIRLTIGNDPDTIDAIEIMGGEHVICPADDVVI
HHHHHHCCCCEEEEECCHHHHHHHCCCCEEEEECCCCCCCHHEEECCCCEEEECCCCEEE
DLENKVVTTPAYMLAGSISEAAKGIDKLVTKVLDLTE
EECCCEECCCHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]