| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930500
Identifier: 218930500
GI number: 218930500
Start: 3894686
End: 3895054
Strand: Reverse
Name: 218930500
Synonym: YPO3486
Alternate gene names: NA
Gene position: 3895054-3894686 (Counterclockwise)
Preceding gene: 218930501
Following gene: 218930499
Centisome position: 83.7
GC content: 42.82
Gene sequence:
>369_bases ATGGGCAGGGATGACCAAAATCATAAACGTCGAAAAAATTTTCCTATCAGGCTACTGGGCTCGGCAAGAAAGGAACTTAG CGATTTAGATGCAATCAATAGAGCCGAATTTTTGGTTGCTATTGATGTCTTTGAACTCCATGGGCCTGGTTCTGGTGTGC CTAACGTGGAGAAGATCGGGGGCGATATGTATGAGCTTAAAACACACAGTAGAAGTCATTGGCTCCGAGGTTTTTACTTT CACTACGTTGATGGCCTTTATATTGTTACGCATATTTTTGCCAAGAAAACCAATAAGGCACCTGATTCCAGCAAAGCACT CGGATTACGTAGGTATAAAGATTTCCTCCGTTCTCAGGGTGAGGAATAA
Upstream 100 bases:
>100_bases ATTTGGCCTTACAGCCATGCCAATTGCTTTGGATAGAGAGATGTATTTGTTAACTTAAGCCACCGATGGTGCTATTAAAG TAAACCTATAAGTTGACAGT
Downstream 100 bases:
>100_bases ATTAGCAACAAAAAGAGGTTGTTATGAAAAGTGATCTGACACTGCACGCTTGGGATGAGGTTCGGGCAGAACTCTTACAA GATGAAGAAACCGCAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGRDDQNHKRRKNFPIRLLGSARKELSDLDAINRAEFLVAIDVFELHGPGSGVPNVEKIGGDMYELKTHSRSHWLRGFYF HYVDGLYIVTHIFAKKTNKAPDSSKALGLRRYKDFLRSQGEE
Sequences:
>Translated_122_residues MGRDDQNHKRRKNFPIRLLGSARKELSDLDAINRAEFLVAIDVFELHGPGSGVPNVEKIGGDMYELKTHSRSHWLRGFYF HYVDGLYIVTHIFAKKTNKAPDSSKALGLRRYKDFLRSQGEE >Mature_121_residues GRDDQNHKRRKNFPIRLLGSARKELSDLDAINRAEFLVAIDVFELHGPGSGVPNVEKIGGDMYELKTHSRSHWLRGFYFH YVDGLYIVTHIFAKKTNKAPDSSKALGLRRYKDFLRSQGEE
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14047; Mature: 13916
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDDQNHKRRKNFPIRLLGSARKELSDLDAINRAEFLVAIDVFELHGPGSGVPNVEKIG CCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHCHHHEEEEEEEEEECCCCCCCCCHHHHC GDMYELKTHSRSHWLRGFYFHYVDGLYIVTHIFAKKTNKAPDSSKALGLRRYKDFLRSQG CCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC EE CC >Mature Secondary Structure GRDDQNHKRRKNFPIRLLGSARKELSDLDAINRAEFLVAIDVFELHGPGSGVPNVEKIG CCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHCHHHEEEEEEEEEECCCCCCCCCHHHHC GDMYELKTHSRSHWLRGFYFHYVDGLYIVTHIFAKKTNKAPDSSKALGLRRYKDFLRSQG CCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC EE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA