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The map label for this gene is yfjD [H]

Identifier: 218930319

GI number: 218930319

Start: 3676704

End: 3677894

Strand: Direct

Name: yfjD [H]

Synonym: YPO3298

Alternate gene names: 218930319

Gene position: 3676704-3677894 (Clockwise)

Preceding gene: 218930318

Following gene: 218930330

Centisome position: 79.01

GC content: 46.77

Gene sequence:

>1191_bases
ATGACACTTAACCGGTATCGGATGCGTCACTTATCCAAACAAGGCAACCGTGCCGCACGTCGGGTGGAAAAGCTCCTGAA
CCGCCCAGATCGCCTAATAAGTTTGGTACTGATTGGCAATAATCTGGTTAACATACTGGCATCTGCGCTGGCGACGATTG
TCGGTATTCGTTTATACGGTGATGCCGGAGTTGCCATCGCAACCGGGGTGCTAACTTTTGTGATCCTGATTTTTGCTGAA
GTCCTGCCAAAAACTATCGCTGCCCTTTATCCTGAACGTGTCGCATTCCCTAGCAGTATGCTCCTGGCCCCCCTGCAAAA
GATCATGCTGCCACTCGTGTGGCTACTGAATACCATTACTCGCGGGTTGATGCATTTATGTGGCATTAGAGGAAATGTGC
ACAGCAGTGATGCGATGAGTAAAGATGAATTACGCACGATAGTGAGTGAGTCCCAATCAAAAATCTCTCGCCGCAATCAA
GACATGTTGATTTCAGTATTAGATCTGGAGAAAGTGACTGTCAGCGATATCATGGTACCGCGTAATGAAGTCGTCGGTAT
CGATATTAATGATGATTGGAAGTCAATCATGCGCCAGCTTACACACTCGCCCCATGGTCGCATTGTGTTATATCGCCAGT
CCTTGGATGACGCTATTGGCATGCTACGTGTGCGGGAAGCCTATCGGTTGATGACGGAGAAAAAGGAATTTAATAAAGAG
AACCTACTGCGTGCAGCCGATGAAATCTACTTTATCCCCGAAGGCACGCCACTCAATGTACAACTGGTGAAATTCCAACG
TAATAAAAAGAAAGTCGGCATGATTGTCGATGAATATGGTGATATTCAAGGTTTAGTGACAGTTGAAGATATTCTGGAGG
AGATCGTGGGGGATTTTACCACCTCAATGTCCCCTACGCTTGCGGAAGAAGTTAATCCACAGAGCGACGGCTCGGTACTG
ATTGATGGCAGTGCCAGCGTCCGCGAAGTGAACAAAGCCTTTAACTGGTCATTACCCGTCGATGCCCGCACCATCAATGG
CATGTTGCTGGAAGAGCTAGAAGAAATTCCGCAAGCACATATTCACGTCCGTCTTGGAAATTACCAAATTGAAGTACTTG
ATGTGCAGGAAAATATGATTAAGCGGGTTAAAATTACCCCAATGACTTCCGCAGAACATTCGACCCTATAA

Upstream 100 bases:

>100_bases
GAATACTGTGTTGGAGCACGTATCAACTAGCTCATTGATCATTATCTTAGTCATTATGATCATCGTTTCAGCTTACTTCT
CTGCATCCGAAACCGGCATG

Downstream 100 bases:

>100_bases
ATAATTCTGTCTAAGCGATAGTCAGTTTAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCATATGCGCCTATAAGGC
TCTGTTACCAGCCGCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTLNRYRMRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAE
VLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVHSSDAMSKDELRTIVSESQSKISRRNQ
DMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDAIGMLRVREAYRLMTEKKEFNKE
NLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVL
IDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL

Sequences:

>Translated_396_residues
MTLNRYRMRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAE
VLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVHSSDAMSKDELRTIVSESQSKISRRNQ
DMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDAIGMLRVREAYRLMTEKKEFNKE
NLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVL
IDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL
>Mature_395_residues
TLNRYRMRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAEV
LPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVHSSDAMSKDELRTIVSESQSKISRRNQD
MLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDAIGMLRVREAYRLMTEKKEFNKEN
LLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVLI
DGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=362, Percent_Identity=25.1381215469613, Blast_Score=122, Evalue=8e-28,
Organism=Escherichia coli, GI145693175, Length=395, Percent_Identity=77.7215189873418, Blast_Score=643, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=408, Percent_Identity=22.7941176470588, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082033, Length=243, Percent_Identity=27.9835390946502, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1786879, Length=265, Percent_Identity=24.9056603773585, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=25.6302521008403, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 44500; Mature: 44368

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNRYRMRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRLYG
CCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHHHEEEC
DAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RGLMHLCGIRGNVHSSDAMSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVSDIMVP
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHCCC
RNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDAIGMLRVREAYRLMTEKKEFNKE
CCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHH
NLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGDFT
HHHHHHHCEEECCCCCCCEEEEEEEECCCCHHCEEEECCCCCCCEEEHHHHHHHHHHHHH
TSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAH
CCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEE
IHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL
EEEEECCEEEEEEECHHHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure 
TLNRYRMRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRLYG
CCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHHHEEEC
DAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RGLMHLCGIRGNVHSSDAMSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVSDIMVP
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHCCC
RNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDAIGMLRVREAYRLMTEKKEFNKE
CCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHH
NLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGDFT
HHHHHHHCEEECCCCCCCEEEEEEEECCCCHHCEEEECCCCCCCEEEHHHHHHHHHHHHH
TSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAH
CCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEE
IHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL
EEEEECCEEEEEEECHHHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]