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The map label for this gene is ydiY [H]

Identifier: 218930311

GI number: 218930311

Start: 3670231

End: 3670998

Strand: Direct

Name: ydiY [H]

Synonym: YPO3290

Alternate gene names: 218930311

Gene position: 3670231-3670998 (Clockwise)

Preceding gene: 218930310

Following gene: 218930318

Centisome position: 78.87

GC content: 46.48

Gene sequence:

>768_bases
ATGTTTTCTTTACGTCATACCAAGGCGTTGCCGTTTTATATCAGCACACTCACTTTATCCTTGTTTAGTGCATCAGCGCT
TGCTGATGCGACTCTCTTTACAGCCTTGGATGATCCTTCCTCGGCTAAAAAAAGCTTTGATGGTTCCGTTGACGCAGGTT
ATACCGCTCAGTCCGGCAATACGACAAACTCATCATTAGCGGCTAACTCAACATTGACTTGGTTCCAGCCCAATACAGCT
TATAGCTTATGGGGAGCGGCCCGTAACACCAGCGCCAATAATCAACGTTCTTCAGAACGTTATCAACTCGGTGGCCGTAC
CCGCTATAATCTGACGGATCGTCATTACATATTCGGCCAAGCCAGTTGGCTAACTGATCGTTATAATGGTTTCGACTCCC
GCTCGGTATTAACGACAGGTTATGGTCGTCAGGTTATGACAACCCCACTACACAATCTGCGGGTAGAATTTGGTCCGGGT
GTTCGCCATGATGAATTTTATGGCGGTGGCCGAGCGACTAAAGCATTAGCATATGGTGGGGCGAACTATACTTATCAGCT
CACGGATAACACGGTATTCAGTGAAGGTGTTTCCGCATTAGCAAACGAAGAAACGACGTTGAACTCAGAAACAGCGTTGA
ATGTTGCTATCAATAAAAGCTTCGCATTACGTTTAGCTTATATCGCGACCTATAATACTAAGCCGCCAACCAGTGCGCCC
AAAAACACGGACACTACGACGTCAATAACGTTGGTTTACGGCCTGTAA

Upstream 100 bases:

>100_bases
AATTAATTACTCAATCCGCTATATCTTCCAAGTAAGTTTAATCACAACTGCTACAATGCGAGCCGCATCACAAACATCAT
TTTTTCACCATAGGTCCATT

Downstream 100 bases:

>100_bases
CCCACCATTCGTCTATATAGCGTGGTGTGATACCGCGCTAATTCTCCTCTCTGCCTTTTCCTTGTCTTAATACCTAATAT
TCATTTCTCAAGAGTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGNTTNSSLAANSTLTWFQPNTA
YSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPG
VRHDEFYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRLAYIATYNTKPPTSAP
KNTDTTTSITLVYGL

Sequences:

>Translated_255_residues
MFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGNTTNSSLAANSTLTWFQPNTA
YSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPG
VRHDEFYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRLAYIATYNTKPPTSAP
KNTDTTTSITLVYGL
>Mature_255_residues
MFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGNTTNSSLAANSTLTWFQPNTA
YSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPG
VRHDEFYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRLAYIATYNTKPPTSAP
KNTDTTTSITLVYGL

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=53.1746031746032, Blast_Score=283, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27759; Mature: 27759

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHCCCCCCCCEEECCCC
TTNSSLAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQ
CCCCCEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHEECCCCEEECCCCCEEEEEE
ASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPGVRHDEFYGGGRATKALAYGG
HHEHHHHCCCCCCCEEEEECCCCEEEECCHHHEEEEECCCCCCCCCCCCCCCEEEEEECC
ANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRLAYIATYNTKPPTSAP
CCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCC
KNTDTTTSITLVYGL
CCCCCCEEEEEEEEC
>Mature Secondary Structure
MFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHCCCCCCCCEEECCCC
TTNSSLAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQ
CCCCCEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHEECCCCEEECCCCCEEEEEE
ASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPGVRHDEFYGGGRATKALAYGG
HHEHHHHCCCCCCCEEEEECCCCEEEECCHHHEEEEECCCCCCCCCCCCCCCEEEEEECC
ANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRLAYIATYNTKPPTSAP
CCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCC
KNTDTTTSITLVYGL
CCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]