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The map label for this gene is ygaY [H]

Identifier: 218930288

GI number: 218930288

Start: 3634789

End: 3635988

Strand: Direct

Name: ygaY [H]

Synonym: YPO3263

Alternate gene names: 218930288

Gene position: 3634789-3635988 (Clockwise)

Preceding gene: 218930287

Following gene: 218930289

Centisome position: 78.1

GC content: 52.92

Gene sequence:

>1200_bases
ATGCAAAAAACTGACACTCCTGGTTTAAGCCCGGCACTGATCGTATTGATGTCGGTAGCCACGGGGCTGGCCGTTGCCAG
TAACTACTACGCCCAGCCCTTGTTGGAAACTATCGCCACAAACTTTAACCTCTCTGTCAATCAGGCCGGTTTTATCGTCA
CCGCCGCCCAATTGGGCTATGCCGTAGGACTGATGTTCTTAGTCCCACTGGGCGATATGTTTGAACGCCGTGGGCTGATT
GTTGGCATGACCTTACTGGCAGCAGGCGGCATGCTGATTACCGCGATGTCGCAAAATCTGACGATGATGATTATCGGGAC
CGCCCTCACCGGCTTGTTCTCTGTGGTCGCACAATTGTTGGTCCCCTTAGCGGCGACACTGGCAGCACCAGAAAAACGCG
GTAAAGTGGTCGGTATCATTATGAGCGGCCTGTTGTTGGGTATTTTACTGGCTCGGACCGTCGCTGGCGCACTGGCAACC
CTCGGCGGCTGGCGCACCATTTATTGGGTTGCCAGTGCCTTGATGTTTATCATGGCACTGGTCCTTTGGCGCTGCCTGCC
ACGCTATAAACAACATACCGGTTTAAATTATGGTCAGTTGCTCGGTTCAATTTTCGCCCTGTTTATTCACACCCCCGTAC
TGCGTACCCGCGCTTTACTCGGGGCATTATCATTCGCCAATTTCAGTGTGCTATGGACATCAATGGCCTTCCTGCTGGCC
GCGCCACCATTCGGTTACTCTGAAGCCACTATTGGGCTATTTGGTTTAGTGGGGGCCGCTGGCGCATTAATGGCGACCAA
AGCGGGTCAATTGGCCGATAAAGGTAAAGCACGTGTCACCACCAGCGCCGGATTAGTTTTACTGTTGCTATCCTGGTTGC
CCATTGCCTTCGGCCAACACTCAATCATCGCACTGATTATTGGGATTATCGTACTGGATTTAGCCGTACAGGCTGTGCAC
GTGACCAACCAGAGCGTGATGTACCGCATGATGCCAGAAGCAAGAAACCGCCTAACCGCAGGCTATATGACGTCTTACTT
TATCGGTGGAGCACTGGGGTCGCTGATTTCAGCCGCCGCCTATCAACATGCTGGCTGGTATGGCGTCTCCACCGCAGGGT
TGGTCCTGTGCCTGTTGAATATAGTGACCTGGCTTGTGGGTAAACGAAGTGATCAACCCGCGAATCAAACCGTAGAATAA

Upstream 100 bases:

>100_bases
TGGCCCTCGCTCGAAAATGCCTCGCCACCAAATTCCAAAGGCAAAACACCTAAAATATGAAATACTCTCTTCCTCCTAAA
TTCAGACACCACATCCCATA

Downstream 100 bases:

>100_bases
TGTGATGATGAAAGCAGTGTGATTACGACCATTGGTTAGCTAACTAATAGTCAATATAGATATAAATTAGGTTATAGGGT
ATTAAGGCAATAACCTCTCT

Product: putative sugar transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MQKTDTPGLSPALIVLMSVATGLAVASNYYAQPLLETIATNFNLSVNQAGFIVTAAQLGYAVGLMFLVPLGDMFERRGLI
VGMTLLAAGGMLITAMSQNLTMMIIGTALTGLFSVVAQLLVPLAATLAAPEKRGKVVGIIMSGLLLGILLARTVAGALAT
LGGWRTIYWVASALMFIMALVLWRCLPRYKQHTGLNYGQLLGSIFALFIHTPVLRTRALLGALSFANFSVLWTSMAFLLA
APPFGYSEATIGLFGLVGAAGALMATKAGQLADKGKARVTTSAGLVLLLLSWLPIAFGQHSIIALIIGIIVLDLAVQAVH
VTNQSVMYRMMPEARNRLTAGYMTSYFIGGALGSLISAAAYQHAGWYGVSTAGLVLCLLNIVTWLVGKRSDQPANQTVE

Sequences:

>Translated_399_residues
MQKTDTPGLSPALIVLMSVATGLAVASNYYAQPLLETIATNFNLSVNQAGFIVTAAQLGYAVGLMFLVPLGDMFERRGLI
VGMTLLAAGGMLITAMSQNLTMMIIGTALTGLFSVVAQLLVPLAATLAAPEKRGKVVGIIMSGLLLGILLARTVAGALAT
LGGWRTIYWVASALMFIMALVLWRCLPRYKQHTGLNYGQLLGSIFALFIHTPVLRTRALLGALSFANFSVLWTSMAFLLA
APPFGYSEATIGLFGLVGAAGALMATKAGQLADKGKARVTTSAGLVLLLLSWLPIAFGQHSIIALIIGIIVLDLAVQAVH
VTNQSVMYRMMPEARNRLTAGYMTSYFIGGALGSLISAAAYQHAGWYGVSTAGLVLCLLNIVTWLVGKRSDQPANQTVE
>Mature_399_residues
MQKTDTPGLSPALIVLMSVATGLAVASNYYAQPLLETIATNFNLSVNQAGFIVTAAQLGYAVGLMFLVPLGDMFERRGLI
VGMTLLAAGGMLITAMSQNLTMMIIGTALTGLFSVVAQLLVPLAATLAAPEKRGKVVGIIMSGLLLGILLARTVAGALAT
LGGWRTIYWVASALMFIMALVLWRCLPRYKQHTGLNYGQLLGSIFALFIHTPVLRTRALLGALSFANFSVLWTSMAFLLA
APPFGYSEATIGLFGLVGAAGALMATKAGQLADKGKARVTTSAGLVLLLLSWLPIAFGQHSIIALIIGIIVLDLAVQAVH
VTNQSVMYRMMPEARNRLTAGYMTSYFIGGALGSLISAAAYQHAGWYGVSTAGLVLCLLNIVTWLVGKRSDQPANQTVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=410, Percent_Identity=25.8536585365854, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42097; Mature: 42097

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTDTPGLSPALIVLMSVATGLAVASNYYAQPLLETIATNFNLSVNQAGFIVTAAQLGY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHHHHHH
AVGLMFLVPLGDMFERRGLIVGMTLLAAGGMLITAMSQNLTMMIIGTALTGLFSVVAQLL
HHHHHHHHCHHHHHHHCCHHHHHHHHHCCCHHEEECCCCCEEEHHHHHHHHHHHHHHHHH
VPLAATLAAPEKRGKVVGIIMSGLLLGILLARTVAGALATLGGWRTIYWVASALMFIMAL
HHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VLWRCLPRYKQHTGLNYGQLLGSIFALFIHTPVLRTRALLGALSFANFSVLWTSMAFLLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APPFGYSEATIGLFGLVGAAGALMATKAGQLADKGKARVTTSAGLVLLLLSWLPIAFGQH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCH
SIIALIIGIIVLDLAVQAVHVTNQSVMYRMMPEARNRLTAGYMTSYFIGGALGSLISAAA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQHAGWYGVSTAGLVLCLLNIVTWLVGKRSDQPANQTVE
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQKTDTPGLSPALIVLMSVATGLAVASNYYAQPLLETIATNFNLSVNQAGFIVTAAQLGY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHHHHHH
AVGLMFLVPLGDMFERRGLIVGMTLLAAGGMLITAMSQNLTMMIIGTALTGLFSVVAQLL
HHHHHHHHCHHHHHHHCCHHHHHHHHHCCCHHEEECCCCCEEEHHHHHHHHHHHHHHHHH
VPLAATLAAPEKRGKVVGIIMSGLLLGILLARTVAGALATLGGWRTIYWVASALMFIMAL
HHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VLWRCLPRYKQHTGLNYGQLLGSIFALFIHTPVLRTRALLGALSFANFSVLWTSMAFLLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APPFGYSEATIGLFGLVGAAGALMATKAGQLADKGKARVTTSAGLVLLLLSWLPIAFGQH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCH
SIIALIIGIIVLDLAVQAVHVTNQSVMYRMMPEARNRLTAGYMTSYFIGGALGSLISAAA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQHAGWYGVSTAGLVLCLLNIVTWLVGKRSDQPANQTVE
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]