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The map label for this gene is yfgC [C]

Identifier: 218930114

GI number: 218930114

Start: 3424784

End: 3426244

Strand: Direct

Name: yfgC [C]

Synonym: YPO3069

Alternate gene names: 218930114

Gene position: 3424784-3426244 (Clockwise)

Preceding gene: 218930112

Following gene: 218930115

Centisome position: 73.59

GC content: 50.65

Gene sequence:

>1461_bases
GTGATCGCCACACTACTCAGTAGCTTGCTGCTCACCGGGCCAATATCTGCTGGAGCGGAAACCCAAGGCCTATTACCCGC
TCAAGACCTATTACCCGATATAGGTACCTCGGCAGGCGCCACGCTCAGTATTGATCAGGAAATGGCGATGGGGGACTTTT
ATGTCCGCCAAATGCGCGCCAGCGCACCATTGATTTATGACCCCTTATTGACACAATACATCAATACATTGGGTAACCGG
CTGGTTGCTAACGCTAACTCAGTACGCACCCCATTCCATTTCTATCTGGTGAATAACGATCAGATTAATGCTTTCGCCTT
TTTTGGCGGTAACGTCGTGCTTCACTCAGCCCTATTCCGTTATACCGATAACGAAAGCGAGTTGGCCTCCGTATTAGCTC
ATGAAATCTCTCACGTTACTCAGCGCCATTTAGCCAGGGCCATGGAAGAACAACAGCGGCTCGCACCACTCACTTGGGTG
GGGGTGTTAGGATCAATTCTGCTAACAATGGCCAGCCCACAAGCAGGCATGGCAGGATTAAGTGGGACATTGGCTGGCGC
TCAGCAAGGTATTATCAGTTTTACTCAAGGCAATGAGCAAGAAGCTGACCGAATTGGTATTCAGGTATTACAACGTTCCG
GGTTTGATCCGCAAGCGATGCCTAATTTCCTGCAAAAACTGGCCGATCAGTCACGATATGTCTCTAAACCCCCCGAAATG
TTATTGACTCACCCCTTACCAGACAGCCGTTTATCTGATGCCCGTAACCGCGCAAATCAGATGAAACCGCACCCTACTGC
CTCATCGCAAGATTATCTCTTTGCCAAAATGCGTATTTTAGGTATGTATGGCGCGGATGAAAATAGCCTGACCCCTGAGC
TGCTGGATAAGCTAAGTAAAGGCACAGTACGTGAGCAACTGGCGGCAAAATACGGTCAGGCAGTCCAGCTTTATCAGGCC
AAAAAATATGATGAAGCCCGTAACCTGCTACAACCCCTACTGGCGCAGCAACCCGGCAATATTTGGTTCCTCGATCTCAT
GACGGATATCGATCTGGGGCAGAATAAATCAGCCGCTGCCATCGCACGTTTACAAAATGCGATGGTAAAACAGAATGATG
AACCGGTACTGCAACTGAATCTGGCTAACGCCTATGTTCAGGGGAGGCAACCGGCAGCAGCCATCAAACTGCTACATCGT
TATACTTTTGCCTATCCGAATGATCCGAATGGCTGGGATCTATTGGCACAAGCGACTGCCACGCAGGGTTTACGCGATCA
AGAACTGGCGGCGCGGGCAGAGAGTCTGGCGTTGAGCGGCAAGCTGACCCAGGCCATTGGCTTGCTCAGCGATGCCAGTG
CGCGGGTGAAGTTGGGCAGCCTGGAACAAGCCCGTTATGATGCCCGAATTGACCAGTTGCGGCGGTTAAACGAGCGTTTT
CGTAAATATCAGAAGTCCTGA

Upstream 100 bases:

>100_bases
GAGCAGTGCAAGGAAGAAGAACTCTTACACATTACGGAGTCTAATTGTCATTACACTAGCAGGGGCAGTCTCGTTTATGA
CAAGTCGGTTAAGTAAGACA

Downstream 100 bases:

>100_bases
TTATTTGGGGCTATTTGCTGGCAAGCCGTTTGTTTATTGGCAGATAGCATCTGGCCTGTTGATAAACAGTAGGCTAGCTA
AGAGAAAAACAGCAAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNR
LVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWV
GVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEM
LLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQA
KKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHR
YTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKLTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERF
RKYQKS

Sequences:

>Translated_486_residues
MIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNR
LVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWV
GVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEM
LLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQA
KKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHR
YTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKLTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERF
RKYQKS
>Mature_486_residues
MIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNR
LVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWV
GVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEM
LLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQA
KKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHR
YTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKLTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERF
RKYQKS

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat

Homologues:

Organism=Escherichia coli, GI1788840, Length=485, Percent_Identity=70.1030927835051, Blast_Score=671, Evalue=0.0,
Organism=Escherichia coli, GI87082185, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3069_YERPE (Q8ZCC3)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AD0373
- RefSeq:   NP_668733.1
- RefSeq:   NP_994004.1
- RefSeq:   YP_002347989.1
- ProteinModelPortal:   Q8ZCC3
- IntAct:   Q8ZCC3
- GeneID:   1146359
- GeneID:   1175890
- GeneID:   2765316
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO3069
- KEGG:   ypk:y1412
- KEGG:   ypm:YP_2691
- HOGENOM:   HBG701418
- OMA:   LSQRHFA
- ProtClustDB:   CLSK874698
- BioCyc:   YPES187410:Y1412-MONOMER
- BioCyc:   YPES214092:YPO3069-MONOMER
- GO:   GO:0016020
- GO:   GO:0005488
- GO:   GO:0006508
- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3

EC number: NA

Molecular weight: Translated: 53419; Mature: 53419

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRA
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH
SAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFR
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHH
YTDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
SGTLAGAQQGIISFTQGNEQEADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEM
CHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH
LLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSK
EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHC
GTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHH
IARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATA
HHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TQGLRDQELAARAESLALSGKLTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
RKYQKS
HHHCCC
>Mature Secondary Structure
MIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRA
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH
SAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFR
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHH
YTDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
SGTLAGAQQGIISFTQGNEQEADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEM
CHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH
LLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSK
EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHC
GTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHH
IARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATA
HHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TQGLRDQELAARAESLALSGKLTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
RKYQKS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430