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The map label for this gene is baeR [H]

Identifier: 218929914

GI number: 218929914

Start: 3189777

End: 3190496

Strand: Direct

Name: baeR [H]

Synonym: YPO2853

Alternate gene names: 218929914

Gene position: 3189777-3190496 (Clockwise)

Preceding gene: 218929913

Following gene: 218929915

Centisome position: 68.54

GC content: 52.92

Gene sequence:

>720_bases
ATGCACGAGTCGCCTCTGTCTGCCAGCCAGTCTGGCTCTGTATTGATCGTTGAAGATGAACCCAAACTTGGCCAGCTACT
CGTCGATTACCTGCAAGCCGCGGGTTACCGCACCCAGTGGCTGACCAACGGGGCAGAAGTCGTGGCGACGGTTCGCCAAA
CGCCACCCGCCATCATCTTGCTGGATCTCATGCTGCCCGGCAGTGATGGCATCACCCTATGCCGTGAAATCCGCCGTTTC
TCTGATATTCCTATTGTCATGGTGACGGCAAAAACGGAAGAGATTGATAGGCTATTGGGGCTGGAGATTGGCGCTGATGA
CTATATCTGCAAGCCCTATAGCCCACGGGAAGTGGTCGCTCGGGTCAAAACCATTCTACGCCGCTGCTCTCAGCAACGTC
ATCAACCCACCGATGACGCACCACTGCTGATCAATGAATCCCGTTTTCAGGCGAGTTACCAAGGGCATATGCTGGAATTA
ACCCCGGCAGAATTCCGCTTACTGAAAATATTAGCCTCCCAACCGGGCCATGTTTTCAGCCGGGAACAACTGCTGAACAA
CCTTTACGACGATTACCGGGTAGTGACTGATCGCACCATTGACAGCCATATCAAAAATCTACAGCGGAAACTGGAATTAC
TCGATGGCGAAAAACCGTTCATCCGCGCGGTATATGGCATGGGGTATCGCTGGGAAGCAGAGATGTGCCGTTTGTTGTAA

Upstream 100 bases:

>100_bases
TGCGCATAGTGGAAAAATCAGCGCTAAACATTCACCTTTGGGTGGCCTGCGGATTACGGTAGTATTCCCCCTATTTCATT
CCATAGGGTAATCCATTGTA

Downstream 100 bases:

>100_bases
TTCTGTTTTTGCCATAGGTGCGCTATGTTGGCGGTGTTAGCTCGTTATGTTTGCGATGCACGGAGCACATTGACCTGACT
TCCGGTCAACCTTGACTACA

Product: DNA-binding transcriptional regulator BaeR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIILLDLMLPGSDGITLCREIRRF
SDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLEL
TPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTIDSHIKNLQRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL

Sequences:

>Translated_239_residues
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIILLDLMLPGSDGITLCREIRRF
SDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLEL
TPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTIDSHIKNLQRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL
>Mature_239_residues
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIILLDLMLPGSDGITLCREIRRF
SDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLEL
TPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTIDSHIKNLQRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL

Specific function: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=241, Percent_Identity=73.8589211618257, Blast_Score=359, Evalue=1e-101,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=40.5286343612335, Blast_Score=163, Evalue=7e-42,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=38.7387387387387, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=36, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=37.5, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=33.1797235023041, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=36.0515021459227, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.3275862068966, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=33.4862385321101, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1786911, Length=231, Percent_Identity=34.1991341991342, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=32.3008849557522, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.5315315315315, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=29.5454545454545, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.4372294372294, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27209; Mature: 27209

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIIL
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCEEEE
LDLMLPGSDGITLCREIRRFSDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVA
EEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCEECCCCCEECCCCHHHHHH
RVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLELTPAEFRLLKILASQPGHVFS
HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCHHH
REQLLNNLYDDYRVVTDRTIDSHIKNLQRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL
HHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHCC
>Mature Secondary Structure
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIIL
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCEEEE
LDLMLPGSDGITLCREIRRFSDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVA
EEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCEECCCCCEECCCCHHHHHH
RVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLELTPAEFRLLKILASQPGHVFS
HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCHHH
REQLLNNLYDDYRVVTDRTIDSHIKNLQRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL
HHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]