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The map label for this gene is yfcD [C]

Identifier: 218929853

GI number: 218929853

Start: 3115268

End: 3115816

Strand: Direct

Name: yfcD [C]

Synonym: YPO2781

Alternate gene names: 218929853

Gene position: 3115268-3115816 (Clockwise)

Preceding gene: 218929852

Following gene: 218929855

Centisome position: 66.94

GC content: 51.73

Gene sequence:

>549_bases
ATGGTGGAGCAAAATCCAGCAGCAGTCATCGAGTGGGTTGACATTGTTGATGAGCAAAATAACGTCATTGCTCAGTCCAG
TCGTCAGCAAATGAGAGCTCAGCGACTACGCCATCGTGCTACCTATATTGTGGTGCACGATGGAATGGGGAAAATTCTGG
TACAACGCCGTACTGAGAGCAAAGATTTTCATCCCGGCAAACTGGATGCCACGGCGGGGGGCGTTGTGCAAAGTGGCGAG
AACTACCTTGAATCCGCTCGGCGCGAGGCTGAAGAAGAATTGGGGATCGCCGGTGTGCCGTTCGCGGAACACGGCCAATT
CTATTTTGAAGAAGAGTGCTGCCGAGTATGGGGGGCGTTATTCAGTTGTGTGTCTCATGGCCCCTTTGCGTTACAACCAG
AGGAAATTGATGAAGTATGCTGGATGGTGCCAGAAGAGATCACCGCCCGCTGTGACGAATTTACACCTGATTCGCTCAAA
GCATTATCACTGTGGCTGACGCGCAACAACGAACAGGATTACGGCAAAATCACTCCCCGCGAAGCGTAA

Upstream 100 bases:

>100_bases
AATAAGATTAAGTCATTGATTAAAAATAGCATTTACTAACAGATACTCTTGATTAACATGTGCGCGTATATCATCGCGCC
TAGATAGAAGGTTTCAGAGG

Downstream 100 bases:

>100_bases
TTCCCACTTGCTCAATAAAAAAACCAAAGCCCCGCTAAAGCGCTTTGGTTTTTTATTATCAGTTTAAACCCCCTCCAAGG
AGGGGGTGATGGTGACGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVEQNPAAVIEWVDIVDEQNNVIAQSSRQQMRAQRLRHRATYIVVHDGMGKILVQRRTESKDFHPGKLDATAGGVVQSGE
NYLESARREAEEELGIAGVPFAEHGQFYFEEECCRVWGALFSCVSHGPFALQPEEIDEVCWMVPEEITARCDEFTPDSLK
ALSLWLTRNNEQDYGKITPREA

Sequences:

>Translated_182_residues
MVEQNPAAVIEWVDIVDEQNNVIAQSSRQQMRAQRLRHRATYIVVHDGMGKILVQRRTESKDFHPGKLDATAGGVVQSGE
NYLESARREAEEELGIAGVPFAEHGQFYFEEECCRVWGALFSCVSHGPFALQPEEIDEVCWMVPEEITARCDEFTPDSLK
ALSLWLTRNNEQDYGKITPREA
>Mature_182_residues
MVEQNPAAVIEWVDIVDEQNNVIAQSSRQQMRAQRLRHRATYIVVHDGMGKILVQRRTESKDFHPGKLDATAGGVVQSGE
NYLESARREAEEELGIAGVPFAEHGQFYFEEECCRVWGALFSCVSHGPFALQPEEIDEVCWMVPEEITARCDEFTPDSLK
ALSLWLTRNNEQDYGKITPREA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain

Homologues:

Organism=Escherichia coli, GI1788637, Length=172, Percent_Identity=79.6511627906977, Blast_Score=270, Evalue=4e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2781_YERPE (Q8ZD12)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AE0339
- RefSeq:   NP_668932.1
- RefSeq:   NP_993711.1
- RefSeq:   YP_002347728.1
- ProteinModelPortal:   Q8ZD12
- SMR:   Q8ZD12
- IntAct:   Q8ZD12
- GeneID:   1146561
- GeneID:   1175612
- GeneID:   2763473
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO2781
- KEGG:   ypk:y1614
- KEGG:   ypm:YP_2383
- HOGENOM:   HBG696017
- OMA:   PYCPDSL
- ProtClustDB:   PRK15393
- BioCyc:   YPES187410:Y1614-MONOMER
- BioCyc:   YPES214092:YPO2781-MONOMER
- InterPro:   IPR000086
- InterPro:   IPR015797
- Gene3D:   G3DSA:3.90.79.10

Pfam domain/function: PF00293 NUDIX; SSF55811 NUDIX_hydrolase

EC number: 3.6.-.- [C]

Molecular weight: Translated: 20654; Mature: 20654

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS51462 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQNPAAVIEWVDIVDEQNNVIAQSSRQQMRAQRLRHRATYIVVHDGMGKILVQRRTES
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCC
KDFHPGKLDATAGGVVQSGENYLESARREAEEELGIAGVPFAEHGQFYFEEECCRVWGAL
CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHH
FSCVSHGPFALQPEEIDEVCWMVPEEITARCDEFTPDSLKALSLWLTRNNEQDYGKITPR
HHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCCCC
EA
CC
>Mature Secondary Structure
MVEQNPAAVIEWVDIVDEQNNVIAQSSRQQMRAQRLRHRATYIVVHDGMGKILVQRRTES
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCC
KDFHPGKLDATAGGVVQSGENYLESARREAEEELGIAGVPFAEHGQFYFEEECCRVWGAL
CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHH
FSCVSHGPFALQPEEIDEVCWMVPEEITARCDEFTPDSLKALSLWLTRNNEQDYGKITPR
HHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCCCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430