| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929801
Identifier: 218929801
GI number: 218929801
Start: 3061203
End: 3061550
Strand: Direct
Name: 218929801
Synonym: YPO2729
Alternate gene names: NA
Gene position: 3061203-3061550 (Clockwise)
Preceding gene: 218929800
Following gene: 218929805
Centisome position: 65.78
GC content: 44.54
Gene sequence:
>348_bases ATGTCATTAAGCAGAAAAGCCGCCAAGGCACAAGACCATAAAATACGAGAACAACTCAAGCGTATGGATAACATCGCTGT TGCTCTATTTTTTGCTATTCCGCTGTGTCTGGCCCTTATTGGCGGGCGTCAGTTGGCGGTATGGACACTACCTGGGTGGT ATCTCTATAGCCTTGGATACATCATTAGTTTCCGGGTTGTTAGCAAAAAATTCACCACCAAAGAGGGGACGGAAATTGCC AGATTCACCAGAACGTATCCTTTCCACTCAGTCAGTTGGCTTATTTTTATTGGCTTTAGCCTACTTTCTATAATCGTTAT TATCGATGTTATGTCCGGAGCGCGCTGA
Upstream 100 bases:
>100_bases CCCGCACCCTATCGATCTTTGTATTGAAGGTGCCTATGACGTTGAGACGGATAACGCAGAGCTACGCGCCCGTTGAGCCA CGGTGAGTAAAGAGTTATTC
Downstream 100 bases:
>100_bases TATTCCAGGATAATAGAAGGGCTCTCTGCTTGGGTGGCAAAGAACCCATTAATGCATTAGCTTTTCTTAACAAATTCAGA CTTGAGCTTCATTTGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGYIISFRVVSKKFTTKEGTEIA RFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR
Sequences:
>Translated_115_residues MSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGYIISFRVVSKKFTTKEGTEIA RFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR >Mature_114_residues SLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGYIISFRVVSKKFTTKEGTEIAR FTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13071; Mature: 12940
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH IISFRVVSKKFTTKEGTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR HHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH IISFRVVSKKFTTKEGTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR HHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA