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The map label for this gene is ompA [H]

Identifier: 218929795

GI number: 218929795

Start: 3050889

End: 3051674

Strand: Direct

Name: ompA [H]

Synonym: YPO2723

Alternate gene names: 218929795

Gene position: 3050889-3051674 (Clockwise)

Preceding gene: 218929794

Following gene: 218929796

Centisome position: 65.56

GC content: 48.22

Gene sequence:

>786_bases
TATGCGGATGGTTTAGAGGTTTTGCTGCGCATTTTAGGGCTCGGTTTTGAGGGGCGCTACAGCATTATCGAAGATGGTGA
TCGGCAATTAACTAAAATACGCCAAGGGTTGCTGACGCTGCTCCAAAGTACCCGAGACACGATCCCACCGGCACTTTCTC
CGCATGGGTTGATCGCACATCAAAACAGAAGACGGCGGGGCATTTTTGTTCCGGTGCGCGTATCCATGCTGTTGTGTGGT
TTCCTCATTGTCGCGACCTTTATTGGATGTAAATACTTTCTCTCGGTACCGGAAAGTGACTTGCTAAAAAGAATGGGAGC
ATTGCAACGTGTGGTTGTGACGCCACCCGTTGCCGCACCAAAACTTCGACTGTCTATTTTATTAAAAGATGAGATAGCGA
AGCAGTTAGTCAGTGTTGATGAAACGAGCAACAACAGCAAAGTCATCTTTAAAGGCGACTCTATGTTTATGGTCGGCTCG
GATAACGTCAGACCTGAAATGATTGACGTAATTAAACGCGTCGCGCAGGAAGTGCATCGCGTTAAAGGGGCAATCCTCAT
CGTCGGGCATACAGACTCTATGCCGATTAATAAACCCGGCTTCCCTAATAACCAGGTACTTTCCGAAAAACGCGCGGCCA
ATGTTGCACGCTATATGGAGCAGGCCGGTATTCCAACCGACAAAATTCGGTTTGAGGGCAAGGGGGAAACGCAACCGGTT
AGCAGCAATGACGATGCGACAGGACGTTCGCAAAACCGCCGCGTAGAAATTTTTGTTAATTATTGA

Upstream 100 bases:

>100_bases
GGCCGGGGTTATAGCAGAAGCTAATCCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCA
CTTTTCATCCGTCGTTGACA

Downstream 100 bases:

>100_bases
GATAACGAATGTCTTATTTGAATCGATTGTTTTCTGGCTGGGCCATGAAACGCATATTGCTGGTCGGCTGCTTTATATTG
CTGGCTGCGGCGATATGGTT

Product: putative OmpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
YADGLEVLLRILGLGFEGRYSIIEDGDRQLTKIRQGLLTLLQSTRDTIPPALSPHGLIAHQNRRRRGIFVPVRVSMLLCG
FLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQLVSVDETSNNSKVIFKGDSMFMVGS
DNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPV
SSNDDATGRSQNRRVEIFVNY

Sequences:

>Translated_261_residues
YADGLEVLLRILGLGFEGRYSIIEDGDRQLTKIRQGLLTLLQSTRDTIPPALSPHGLIAHQNRRRRGIFVPVRVSMLLCG
FLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQLVSVDETSNNSKVIFKGDSMFMVGS
DNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPV
SSNDDATGRSQNRRVEIFVNY
>Mature_261_residues
YADGLEVLLRILGLGFEGRYSIIEDGDRQLTKIRQGLLTLLQSTRDTIPPALSPHGLIAHQNRRRRGIFVPVRVSMLLCG
FLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAPKLRLSILLKDEIAKQLVSVDETSNNSKVIFKGDSMFMVGS
DNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPV
SSNDDATGRSQNRRVEIFVNY

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=134, Percent_Identity=31.3432835820896, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 29007; Mature: 29007

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
YADGLEVLLRILGLGFEGRYSIIEDGDRQLTKIRQGLLTLLQSTRDTIPPALSPHGLIAH
CCCHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
QNRRRRGIFVPVRVSMLLCGFLIVATFIGCKYFLSVPESDLLKRMGALQRVVVTPPVAAP
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCC
KLRLSILLKDEIAKQLVSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHR
CHHEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHH
VKGAILIVGHTDSMPINKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPV
HCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCC
SSNDDATGRSQNRRVEIFVNY
CCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]