| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is srmB [H]
Identifier: 218929780
GI number: 218929780
Start: 3034941
End: 3036266
Strand: Reverse
Name: srmB [H]
Synonym: YPO2708
Alternate gene names: 218929780
Gene position: 3036266-3034941 (Counterclockwise)
Preceding gene: 218929782
Following gene: 218929776
Centisome position: 65.24
GC content: 50.53
Gene sequence:
>1326_bases ATGACTGTAACCAATTTTTCCGAACTCGATCTCGATGAACGTCTGATTGACGCACTGCGCGACAAAGGCTATGAGCGTCC TACGGCTATCCAGGCTTCGGCGATCCCGCCGGCTATGGATGGGCGTGACGTATTAGGTTCGGCTCCAACAGGTACCGGCA AAACTGCCGCCTTTTTGCTGCCAGCCTTGCAGCATTTGCTGGATTTCCCCCGCAAAAAATCCGGGCCACCGCGGATCCTG ATCCTGACGCCAACCCGTGAGTTAGCCATGCAAGTGGCAGACCAAGCCCGTGAACTGGCAAAGTATACTCAGTTGGATAT CGCCACAATAACCGGCGGCGTGGCATATATGAACCATGCCGAAGTCTTCAGTGAGAATCAGGATGTTGTCGTTGCCACGA CAGGCCGCCTGCTGCAATACATCAAAGAAGAAAACTTTGATTGTCGTGCGGTAGAGACCCTGATCCTGGATGAAGCTGAC CGTATGCTGGACATGGGTTTTGCCCAAGATATTGAAACCATCTCAGCCGAAACCCGCTGGCGTAAGCAAACACTGCTGTT CTCTGCCACTCTTGAAGGTGAAGCCATCCGCGAATTTGCGGAGCGCATTCTCAATGAGCCAGTAGAACTTGAGGCCGATC CATCGCGCCGCGAACGCAAAAAAATTCAGCAATGGTACTACCGGGCTGACGACATCAAGCATAAGACAGCGTTACTTTGT CATCTGCTGAAACAGCCCGATGTCTCGAAGTCCATCATTTTTGTTCGTACCCGCGAGCGTGTCCATGAGTTAGTCAGTTG GCTACGTGAGGCGGGCATTAATGCCTGGTTCCTTGAAGGCGAAATGGTACAAGCTAAACGTACCGAAGCGGTCATTCGCT TGGGTGATGGCCGGGTAAATGTGCTGGTTGCCACCGATATTGCCTCACGCGGGTTGGATATTGATGATATCAGCCATGTA TTCAACTTTGATATGCCACGCACCGCCGATGTTTATTTACATCGTATTGGCCGTACTGGCCGTGCTGGCCGCAAAGGCGT CGCCATTTCCTTGGTTGAAGCTCATGATCATATCTTGTTAGGCAAAATTGGCCGTTATCTTAACGAACCACTGAAACCAC GCGTTATTGATGAGTTGCGCCCAACGAGCAAGGCACCAAGTGAAAAAGCGACGGGTAAACCCTCTAAAAAGGTTTTAGCG AAGCGTAAAGAACAAAAAGAATCCAGCAAAGAGAAAGTAAAGGTTAAGGTTCGTCATCGTGATGCCAAAAACGTTGGTAA GCGGCGTACACCAAAAGCAAAACCTGATACCAAGAGTGCTGGTTAG
Upstream 100 bases:
>100_bases TAGGACAATATTATTAAAGGGAAAAGACATCATTCCGACTTAAACAGGTGAAGAATTCGGCTAACCCGTCTATAATCGGC GCCCCAAGTAGAGGAAGACC
Downstream 100 bases:
>100_bases TGATATGCACGACAACAAAGCCGCTGCTCACATAGCGGTTTTGTTGTCAGATATCTGCTCATTACCAATACCATTTTCAG ACTGAAATGACATTGCGAAT
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPTGTGKTAAFLLPALQHLLDFPRKKSGPPRIL ILTPTRELAMQVADQARELAKYTQLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIETISAETRWRKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLC HLLKQPDVSKSIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVNVLVATDIASRGLDIDDISHV FNFDMPRTADVYLHRIGRTGRAGRKGVAISLVEAHDHILLGKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLA KRKEQKESSKEKVKVKVRHRDAKNVGKRRTPKAKPDTKSAG
Sequences:
>Translated_441_residues MTVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPTGTGKTAAFLLPALQHLLDFPRKKSGPPRIL ILTPTRELAMQVADQARELAKYTQLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIETISAETRWRKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLC HLLKQPDVSKSIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVNVLVATDIASRGLDIDDISHV FNFDMPRTADVYLHRIGRTGRAGRKGVAISLVEAHDHILLGKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLA KRKEQKESSKEKVKVKVRHRDAKNVGKRRTPKAKPDTKSAG >Mature_440_residues TVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPTGTGKTAAFLLPALQHLLDFPRKKSGPPRILI LTPTRELAMQVADQARELAKYTQLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADR MLDMGFAQDIETISAETRWRKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLCH LLKQPDVSKSIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVNVLVATDIASRGLDIDDISHVF NFDMPRTADVYLHRIGRTGRAGRKGVAISLVEAHDHILLGKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLAK RKEQKESSKEKVKVKVRHRDAKNVGKRRTPKAKPDTKSAG
Specific function: RNA-dependent ATPase activity. Acts in 50S ribosomal subunit biogenesis at low temperatures, acting before DeaD/CsdA. Suppressor of a mutant defective in 50S ribosomal subunit assembly. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=34.9333333333333, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=36.3387978142077, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=36.3387978142077, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=35.3260869565217, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=37.7604166666667, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI164419743, Length=381, Percent_Identity=35.9580052493438, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI51094101, Length=381, Percent_Identity=35.9580052493438, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=35.3932584269663, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=35.3932584269663, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=35.4570637119114, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI262118318, Length=369, Percent_Identity=33.3333333333333, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=33.5164835164835, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=34.6368715083799, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI216548263, Length=369, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI262231852, Length=369, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI13518015, Length=369, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=33.9943342776204, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI222352149, Length=355, Percent_Identity=34.9295774647887, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=33.6158192090396, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI41327771, Length=440, Percent_Identity=30.2272727272727, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=32.7913279132791, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=33.7110481586402, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=33.7110481586402, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=33.1670822942643, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=34.4173441734417, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=33.5195530726257, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=33.6043360433604, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=33.6043360433604, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=31.7934782608696, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI13514831, Length=355, Percent_Identity=34.6478873239437, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=32.7913279132791, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=32.7913279132791, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=32.7913279132791, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI6005743, Length=391, Percent_Identity=31.2020460358056, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI8922886, Length=391, Percent_Identity=30.9462915601023, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=31.8918918918919, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=31.3513513513514, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=31.151832460733, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI38569505, Length=382, Percent_Identity=31.151832460733, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=32.3369565217391, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI38327634, Length=348, Percent_Identity=32.4712643678161, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI50659095, Length=376, Percent_Identity=31.9148936170213, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=30.9139784946237, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=31.043956043956, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=31.2320916905444, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI256223453, Length=379, Percent_Identity=28.4960422163588, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI41327779, Length=365, Percent_Identity=31.7808219178082, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=29.1358024691358, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI9966805, Length=333, Percent_Identity=30.9309309309309, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI256773275, Length=383, Percent_Identity=31.5926892950392, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=26.8948655256724, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=27.8443113772455, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI20336298, Length=219, Percent_Identity=34.2465753424658, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1788930, Length=434, Percent_Identity=79.9539170506912, Blast_Score=678, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=408, Percent_Identity=41.9117647058824, Blast_Score=284, Evalue=9e-78, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=40.4825737265416, Blast_Score=267, Evalue=9e-73, Organism=Escherichia coli, GI1790214, Length=364, Percent_Identity=38.1868131868132, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=38.6363636363636, Blast_Score=215, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17552642, Length=369, Percent_Identity=38.2113821138211, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17555296, Length=353, Percent_Identity=36.2606232294618, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17510559, Length=400, Percent_Identity=33.75, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI86570094, Length=369, Percent_Identity=36.8563685636856, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71999646, Length=370, Percent_Identity=34.5945945945946, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI71999644, Length=370, Percent_Identity=34.5945945945946, Blast_Score=217, Evalue=8e-57, Organism=Caenorhabditis elegans, GI115533224, Length=357, Percent_Identity=36.1344537815126, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=34.3406593406593, Blast_Score=211, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=36.4829396325459, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=33.7874659400545, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI17507879, Length=391, Percent_Identity=35.8056265984655, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=33.6065573770492, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI17507945, Length=396, Percent_Identity=34.3434343434343, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI32565321, Length=442, Percent_Identity=31.447963800905, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=31.4666666666667, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=35.0974930362117, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=33.509234828496, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=31.8801089918256, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=31.8801089918256, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=31.8801089918256, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17509811, Length=379, Percent_Identity=32.7176781002639, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=34.0540540540541, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.2946175637394, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI115532548, Length=415, Percent_Identity=32.5301204819277, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI115532546, Length=391, Percent_Identity=32.9923273657289, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17507641, Length=405, Percent_Identity=31.6049382716049, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17505370, Length=361, Percent_Identity=32.6869806094183, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI32564046, Length=392, Percent_Identity=31.8877551020408, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI25148203, Length=416, Percent_Identity=26.2019230769231, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=29.2263610315186, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=30.8483290488432, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=29.0909090909091, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=29.0909090909091, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=31.4666666666667, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=28.9002557544757, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17556951, Length=345, Percent_Identity=30.4347826086957, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=27.3209549071618, Blast_Score=144, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=28.169014084507, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17557982, Length=386, Percent_Identity=29.2746113989637, Blast_Score=114, Evalue=8e-26, Organism=Caenorhabditis elegans, GI25148205, Length=343, Percent_Identity=24.4897959183673, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71982862, Length=218, Percent_Identity=31.1926605504587, Blast_Score=104, Evalue=7e-23, Organism=Caenorhabditis elegans, GI25148291, Length=510, Percent_Identity=22.5490196078431, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17565430, Length=396, Percent_Identity=26.2626262626263, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17566630, Length=330, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=36.7231638418079, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6324217, Length=381, Percent_Identity=33.5958005249344, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321360, Length=377, Percent_Identity=36.3395225464191, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6325138, Length=382, Percent_Identity=34.5549738219895, Blast_Score=212, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=375, Percent_Identity=34.1333333333333, Blast_Score=212, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6321856, Length=427, Percent_Identity=32.7868852459016, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6320224, Length=373, Percent_Identity=32.171581769437, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324778, Length=387, Percent_Identity=32.0413436692506, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=368, Percent_Identity=34.5108695652174, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=362, Percent_Identity=35.3591160220994, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322912, Length=354, Percent_Identity=33.8983050847458, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=354, Percent_Identity=33.8983050847458, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6320449, Length=403, Percent_Identity=31.7617866004963, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=33.4210526315789, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=29.1970802919708, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=30.3867403314917, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=375, Percent_Identity=30.4, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.1927710843373, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=369, Percent_Identity=31.4363143631436, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6319714, Length=453, Percent_Identity=28.0353200883002, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6321111, Length=351, Percent_Identity=30.4843304843305, Blast_Score=152, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=388, Percent_Identity=32.2164948453608, Blast_Score=152, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6320173, Length=240, Percent_Identity=34.1666666666667, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=25.8620689655172, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322876, Length=182, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=37.1352785145889, Blast_Score=257, Evalue=9e-69, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=37.874659400545, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.4180790960452, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI28574962, Length=385, Percent_Identity=36.6233766233766, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=34.8066298342541, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=34.8773841961853, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=34.4444444444444, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=34.2245989304813, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583281, Length=374, Percent_Identity=34.2245989304813, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=33.7837837837838, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24645031, Length=364, Percent_Identity=33.5164835164835, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=35.5795148247978, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=33.9572192513369, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17977678, Length=396, Percent_Identity=33.8383838383838, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=34.3163538873995, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24584994, Length=439, Percent_Identity=30.751708428246, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=32.5779036827195, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=32.5779036827195, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=32.5779036827195, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=36.0128617363344, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=32.2751322751323, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=32.0652173913043, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=32.0652173913043, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=32.0652173913043, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=32.0652173913043, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24643725, Length=383, Percent_Identity=32.6370757180157, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24642822, Length=397, Percent_Identity=29.7229219143577, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI28571808, Length=424, Percent_Identity=29.4811320754717, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI28571809, Length=424, Percent_Identity=29.4811320754717, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=31.2320916905444, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI20130173, Length=439, Percent_Identity=26.879271070615, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI17647335, Length=358, Percent_Identity=27.9329608938547, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI19920478, Length=375, Percent_Identity=29.8666666666667, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI21355559, Length=398, Percent_Identity=30.6532663316583, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24640164, Length=387, Percent_Identity=27.6485788113695, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI17136666, Length=398, Percent_Identity=26.8844221105528, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI28571338, Length=411, Percent_Identity=27.7372262773723, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI18859659, Length=411, Percent_Identity=27.7372262773723, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=26.7857142857143, Blast_Score=108, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49639; Mature: 49507
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPTGTGKTAAFLL CCCCCCHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCHHHHHH PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKYTQLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLC HHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH HLLKQPDVSKSIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVN HHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCEEEEECCCEEE VLVATDIASRGLDIDDISHVFNFDMPRTADVYLHRIGRTGRAGRKGVAISLVEAHDHILL EEEEECHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH GKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLAKRKEQKESSKEKVKVKVRHR HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEEC DAKNVGKRRTPKAKPDTKSAG CHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPTGTGKTAAFLL CCCCCHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCHHHHHH PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKYTQLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLC HHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH HLLKQPDVSKSIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVN HHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCEEEEECCCEEE VLVATDIASRGLDIDDISHVFNFDMPRTADVYLHRIGRTGRAGRKGVAISLVEAHDHILL EEEEECHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH GKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLAKRKEQKESSKEKVKVKVRHR HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEEC DAKNVGKRRTPKAKPDTKSAG CHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2461520; 9278503 [H]