| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is pcp [H]
Identifier: 218929775
GI number: 218929775
Start: 3030775
End: 3031422
Strand: Direct
Name: pcp [H]
Synonym: YPO2703
Alternate gene names: 218929775
Gene position: 3030775-3031422 (Clockwise)
Preceding gene: 218929774
Following gene: 218929777
Centisome position: 65.13
GC content: 49.85
Gene sequence:
>648_bases ATGAGACGTGTATTAATTACCGGGTTCGAACCTTTTGGTGGGGAGCGGATCAATCCTTCCTGGGAAGTGGTCAAACAAAT GAATGATTTAATGATGGGTGGCGTCAGAATTGTGGCGCGCCAGCTACCCTGCGCATTCGGTGAGGCACTGACCGCCCTGA ACACCGCGATAGATGATGTCCAGCCCGTATTGGTACTTGCTATCGGTCAGGCGGGAGGCCGTGCGGATATTACCATTGAA CGGGTGGCGATTAACGTTGATGACGCGCGTATCCCAGACAATTTGGGTAATCAGCCCGTTGATCAGCCTATTATTCAAGA GGGACCTGCGGCATATTTCACCCGCCTACCGATCAAAGCCATGGTTCAGGGGATACGAGAAGCGGGGATACCGGCATCAG TTTCTCAAACTGCGGGTACCTATGTGTGTAACCATGTTATGTATGGTTTATTGCATCGGTTAAATCAGTTTAATAATGAG GTCAAGGGCGGTTTTATTCATATCCCTTATTTGCCAGAACAGGCAGTTGATCACCCCGGTGCGCCCAGTATGTCGGCACA ATCAGTGTTGGTCGCGTTAGAATTGGCTATCTCTATCGCATTGCAGATTGAGCATGATTTGCATATCACGGGGGGAGCAG TTCACTGA
Upstream 100 bases:
>100_bases CAAAAATGCGGTCATCAAAGCGCAAATCCCAACCGGGGTAGCTCTGTTGATTGTTAACGTATTTTTACTGTATTTCCTGA TGTTTCTCTAAGGAGAGGCG
Downstream 100 bases:
>100_bases TCTTCCAATAACCTCACGGCAGCCGAAGGTGGCGTGAGGTTACAGACAACGTCCTGGCTTAAGAGGTGGGGTTGTGATCT GAACGGTGATTTACTCCACC
Product: pyrrolidone-carboxylate peptidase
Products: NA
Alternate protein names: 5-oxoprolyl-peptidase; Pyroglutamyl-peptidase I; PGP-I; Pyrase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRRVLITGFEPFGGERINPSWEVVKQMNDLMMGGVRIVARQLPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIE RVAINVDDARIPDNLGNQPVDQPIIQEGPAAYFTRLPIKAMVQGIREAGIPASVSQTAGTYVCNHVMYGLLHRLNQFNNE VKGGFIHIPYLPEQAVDHPGAPSMSAQSVLVALELAISIALQIEHDLHITGGAVH
Sequences:
>Translated_215_residues MRRVLITGFEPFGGERINPSWEVVKQMNDLMMGGVRIVARQLPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIE RVAINVDDARIPDNLGNQPVDQPIIQEGPAAYFTRLPIKAMVQGIREAGIPASVSQTAGTYVCNHVMYGLLHRLNQFNNE VKGGFIHIPYLPEQAVDHPGAPSMSAQSVLVALELAISIALQIEHDLHITGGAVH >Mature_215_residues MRRVLITGFEPFGGERINPSWEVVKQMNDLMMGGVRIVARQLPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIE RVAINVDDARIPDNLGNQPVDQPIIQEGPAAYFTRLPIKAMVQGIREAGIPASVSQTAGTYVCNHVMYGLLHRLNQFNNE VKGGFIHIPYLPEQAVDHPGAPSMSAQSVLVALELAISIALQIEHDLHITGGAVH
Specific function: Removes 5-oxoproline from various penultimate amino acid residues except L-proline [H]
COG id: COG2039
COG function: function code O; Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C15 family [H]
Homologues:
Organism=Homo sapiens, GI8923198, Length=171, Percent_Identity=25.7309941520468, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000816 - InterPro: IPR016125 [H]
Pfam domain/function: PF01470 Peptidase_C15 [H]
EC number: =3.4.19.3 [H]
Molecular weight: Translated: 23142; Mature: 23142
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS01333 PYRASE_GLU ; PS01334 PYRASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLITGFEPFGGERINPSWEVVKQMNDLMMGGVRIVARQLPCAFGEALTALNTAIDDV CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPIIQEGPAAYFTRLPIKA CEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCHHH MVQGIREAGIPASVSQTAGTYVCNHVMYGLLHRLNQFNNEVKGGFIHIPYLPEQAVDHPG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCHHHCCCCC APSMSAQSVLVALELAISIALQIEHDLHITGGAVH CCCCCHHHHHHHHHHHHHHHEEEECCEEECCCCCC >Mature Secondary Structure MRRVLITGFEPFGGERINPSWEVVKQMNDLMMGGVRIVARQLPCAFGEALTALNTAIDDV CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPIIQEGPAAYFTRLPIKA CEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCHHH MVQGIREAGIPASVSQTAGTYVCNHVMYGLLHRLNQFNNEVKGGFIHIPYLPEQAVDHPG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCHHHCCCCC APSMSAQSVLVALELAISIALQIEHDLHITGGAVH CCCCCHHHHHHHHHHHHHHHEEEECCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA