| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is ureB
Identifier: 218929740
GI number: 218929740
Start: 2991771
End: 2992205
Strand: Direct
Name: ureB
Synonym: YPO2666
Alternate gene names: 218929740
Gene position: 2991771-2992205 (Clockwise)
Preceding gene: 218929739
Following gene: 218929741
Centisome position: 64.29
GC content: 49.43
Gene sequence:
>435_bases ATGAGCGCGAAGAAAAGTACGAAAGACAGTAAAGAACAGAATACGCCACTGGGTGGCCTCGTTTTAGCGGAAACACCAAT TACGTTTAACGAAAATAAACCCGTGACCAAAGTTAAAGTCCGCAATACCGGTGACCGGCCAATTCAGGTTGGGTCCCATT TCCATTTCTTCGAGGTTAACCGCGCACTGGAATTTGATCGTGCAGCAGCTTATGGCAAGCGCCTCAATATCTCCTCGACG ACGGCTATCCGTTTTGAACCTGGTGATGAAACTGAAGTTCCGCTTATCCCCTTTGGCGGCAAGCAGACACTGTATGGTTT TAACAATCTTGTCGATGGGTGGACCGGTGAGGGTGTGGTACCCAACAGTGAGCGCCCGGATAAACTCGCGGCTATCCGCC TTGCCGCCGAGCGTGGTTTTAAATCATCTAAATAA
Upstream 100 bases:
>100_bases TTTACCGATGGCAGCCGTCTGGTCACGGTACACGACCCTATTAAGTAGTGACGGCAACATGCGAGTAAAACCTGAACTGA TTATTGCAGAGGATTCAAGC
Downstream 100 bases:
>100_bases CGCCTTGTTTACAGAGCAAATCATCGAAATTCGCATACGTGTAATGGGGTAAAGCAGTTACACGCACCGGAAAAAGAAAG GAGCGACAGATGCCTCAAAT
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVNRALEFDRAAAYGKRLNISST TAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK
Sequences:
>Translated_144_residues MSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVNRALEFDRAAAYGKRLNISST TAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK >Mature_143_residues SAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVNRALEFDRAAAYGKRLNISSTT AIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE2_YERP3 (A7FFN1)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001400059.1 - ProteinModelPortal: A7FFN1 - SMR: A7FFN1 - STRING: A7FFN1 - GeneID: 5388163 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_1078 - eggNOG: COG0832 - HOGENOM: HBG365918 - OMA: PISFNED - ProtClustDB: PRK13198 - BioCyc: YPSE349747:YPSIP31758_1078-MONOMER - GO: GO:0005737 - HAMAP: MF_01954 - InterPro: IPR002019 - Gene3D: G3DSA:2.10.150.10 - TIGRFAMs: TIGR00192
Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta
EC number: =3.5.1.5
Molecular weight: Translated: 15822; Mature: 15691
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVN CCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEEEEECCCCCEEEECCEEEEEEEC RALEFDRAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVV CCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCC PNSERPDKLAAIRLAAERGFKSSK CCCCCCCHHHEEEEHHHCCCCCCC >Mature Secondary Structure SAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVN CCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEEEEECCCCCEEEECCEEEEEEEC RALEFDRAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVV CCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCC PNSERPDKLAAIRLAAERGFKSSK CCCCCCCHHHEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA