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The map label for this gene is yliA [C]

Identifier: 218929738

GI number: 218929738

Start: 2989552

End: 2990217

Strand: Direct

Name: yliA [C]

Synonym: YPO2664

Alternate gene names: 218929738

Gene position: 2989552-2990217 (Clockwise)

Preceding gene: 218929737

Following gene: 218929739

Centisome position: 64.24

GC content: 48.35

Gene sequence:

>666_bases
ATGCTTAGTGTCGAGAATCTGACCATCGTTCAAAGCGGAAAGCGGCTATGGGAGTCGGTATCCTTCACTTTGGCACCAGG
GGAACGATTAGGTATCTCAGCACCCAGTGGCTTTGGTAAAACGACGCTGGGCCGGGTATTAGCACAATGGCAGTCGGCAA
CTGCGGGTCATATCCTGTTAGAGGGGAAACCATTAGCTAAAAAAGGATATTGTCCGGTCCAACTGGTTCCTCAGCACCCA
GAGCAAAGTTTTAATCCTTATCGCACCACCGGTGAGAGCCTACATGATGCCTGGCGGCCCGATGCTGATTGGTTGGCGCG
GATGGCGGTTAATCCTGATTGGCTGCAACGCAGGCCGGATGAATTATCGGGTGGTGAATTGGCCCGCATTGCTTTGTTAC
GCGCGCTGGATCCACGGACGCGTTATTTGATTGCGGATGAGGTTACCGCACAATTAGACGCCCGTATTCAGGCTCAAATT
TGGCAAGTTTTATTGGAAGAAGCTGAACACCGTCGATTAGGGCTCATTGTTTTTAGCCATAATAAGGCATTATTAGAAAA
AGTGTGTTCACGTATTTGGATCCCTGAAAGAGAAAGTAAAACTACAATTTATCCAACGCCATTGGTTAAACCCCATTTGG
GGTTAGCAATGGTAAAAACGGGTTAA

Upstream 100 bases:

>100_bases
AAAAATAGCGGTGGTAGCCCATGGTTGCAGTCACTCTGGGCCGCATTACCGGAACAGCAATTTGTCAGCAAGCCAATCCC
ACTGGCTGAGGTGGCCGACT

Downstream 100 bases:

>100_bases
TGGTAAAAACAGGTTGATGCTAAAAATAGGTTAATACTAAAAAGAACCGTGGAATGCGATTAAATTAAATATCACAGCTA
GAATAATAACTAATAGTGAT

Product: putative transport ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLSVENLTIVQSGKRLWESVSFTLAPGERLGISAPSGFGKTTLGRVLAQWQSATAGHILLEGKPLAKKGYCPVQLVPQHP
EQSFNPYRTTGESLHDAWRPDADWLARMAVNPDWLQRRPDELSGGELARIALLRALDPRTRYLIADEVTAQLDARIQAQI
WQVLLEEAEHRRLGLIVFSHNKALLEKVCSRIWIPERESKTTIYPTPLVKPHLGLAMVKTG

Sequences:

>Translated_221_residues
MLSVENLTIVQSGKRLWESVSFTLAPGERLGISAPSGFGKTTLGRVLAQWQSATAGHILLEGKPLAKKGYCPVQLVPQHP
EQSFNPYRTTGESLHDAWRPDADWLARMAVNPDWLQRRPDELSGGELARIALLRALDPRTRYLIADEVTAQLDARIQAQI
WQVLLEEAEHRRLGLIVFSHNKALLEKVCSRIWIPERESKTTIYPTPLVKPHLGLAMVKTG
>Mature_221_residues
MLSVENLTIVQSGKRLWESVSFTLAPGERLGISAPSGFGKTTLGRVLAQWQSATAGHILLEGKPLAKKGYCPVQLVPQHP
EQSFNPYRTTGESLHDAWRPDADWLARMAVNPDWLQRRPDELSGGELARIALLRALDPRTRYLIADEVTAQLDARIQAQI
WQVLLEEAEHRRLGLIVFSHNKALLEKVCSRIWIPERESKTTIYPTPLVKPHLGLAMVKTG

Specific function: Probably part of a binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for energy coupling to the transport system [H]

COG id: COG1124

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9665248, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI145693107, Length=198, Percent_Identity=31.8181818181818, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789891, Length=200, Percent_Identity=32, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787500, Length=199, Percent_Identity=30.6532663316583, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1788506, Length=199, Percent_Identity=29.6482412060301, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1789962, Length=218, Percent_Identity=26.605504587156, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787547, Length=211, Percent_Identity=26.5402843601896, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1787758, Length=187, Percent_Identity=31.0160427807487, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081791, Length=209, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=26.6331658291457, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=25.1101321585903, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789890, Length=237, Percent_Identity=27.4261603375527, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789963, Length=207, Percent_Identity=28.0193236714976, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994883, Length=202, Percent_Identity=27.2277227722772, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994997, Length=214, Percent_Identity=25.2336448598131, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787759, Length=205, Percent_Identity=25.8536585365854, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=26.7605633802817, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 24755; Mature: 24755

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVENLTIVQSGKRLWESVSFTLAPGERLGISAPSGFGKTTLGRVLAQWQSATAGHILL
CCCCCCCCEEHHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
EGKPLAKKGYCPVQLVPQHPEQSFNPYRTTGESLHDAWRPDADWLARMAVNPDWLQRRPD
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHCCCC
ELSGGELARIALLRALDPRTRYLIADEVTAQLDARIQAQIWQVLLEEAEHRRLGLIVFSH
CCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC
NKALLEKVCSRIWIPERESKTTIYPTPLVKPHLGLAMVKTG
CHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MLSVENLTIVQSGKRLWESVSFTLAPGERLGISAPSGFGKTTLGRVLAQWQSATAGHILL
CCCCCCCCEEHHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
EGKPLAKKGYCPVQLVPQHPEQSFNPYRTTGESLHDAWRPDADWLARMAVNPDWLQRRPD
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHCCCC
ELSGGELARIALLRALDPRTRYLIADEVTAQLDARIQAQIWQVLLEEAEHRRLGLIVFSH
CCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC
NKALLEKVCSRIWIPERESKTTIYPTPLVKPHLGLAMVKTG
CHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]