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The map label for this gene is yddQ [C]

Identifier: 218929736

GI number: 218929736

Start: 2987947

End: 2988753

Strand: Direct

Name: yddQ [C]

Synonym: YPO2662

Alternate gene names: 218929736

Gene position: 2987947-2988753 (Clockwise)

Preceding gene: 218929735

Following gene: 218929737

Centisome position: 64.21

GC content: 48.45

Gene sequence:

>807_bases
ATGACTTATAACCCAAACCGGGCCTTGTTCCGGCTGTTCGTCTCACTGGTCTTATTATCTATTTTAATCGTTTATGGTTG
GCTAATTTATGGCGCTGAAGTTCCAATGGATTTAATGGCCCGCCGGCAACCACCTTCAACGACCTATTGGTTTGGTACTG
ATAGCTTGGGGCGCGATTTATGGCTGCGCTGTTTTCAGGGAATGACTACCAGCTTGCAAATTGGCCTGATTGCCGCGTTT
GCCAGTGGTCTGCTCGCCATGCTGACGGCCAGTTTATGTGCCGTTAATAAAACCCTCGATTATCTGATCCGTGGGTTGAT
TGACAGTATGTTGGCATTGCCTCATTTATTGCTGTTAGTCCTGATTTGCTTCACGTTAGGAGGCGGGAAACAAGGGGTTA
TCCTGGCGGTAGCATTAACCCACTGGCCAAAGCTGGCCTTGATTTTACGTGCCGAGATTTTACGTATTCGTGAGACAGAT
TATGTGATGCTGTCTCATCGGCTGGGCAACAGTAATTTCTACTGTTGGCGTCATCATCTGCTACCGTTATTACTACCACA
GTGGATTGTTGGCACACTGTTGATGTTTCCCCATGCGGTGTTGCACAGTGCCGCACTCAGCTTTTTGGGCTTCGGGCTTG
CGCCTCATGAACCGTCATTGGGGATATTACTGGCCGATGCTTTACGTTATCTGAGCAGTGGGTCATGGTGGCTGGCATTT
TTTCCTGGCTTGATTTTGGTGGGATTGGTGCTGATATTTGATCAGTTCGCGCGATCACTACAACAACTCTGGGTGAGGTT
AGCCTGA

Upstream 100 bases:

>100_bases
TGATGGGAATAGTGATGTTCTGCGCCATATTGGTCTTTTGCGGTAATAGCATTGCGAATGCCTTGTTACACCGTTTGAAC
CGGGGGGCTGCGCGGCAATT

Downstream 100 bases:

>100_bases
TGCTGAGATTTGACCAATTTGCTATTGATGTCGCTCATTATCGTTGGTTGGGCCGGAAAACCTGGCACCCGTTGTTGAGC
CATATTTCTCTGGATGTGAA

Product: binding-protein-dependent transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTYNPNRALFRLFVSLVLLSILIVYGWLIYGAEVPMDLMARRQPPSTTYWFGTDSLGRDLWLRCFQGMTTSLQIGLIAAF
ASGLLAMLTASLCAVNKTLDYLIRGLIDSMLALPHLLLLVLICFTLGGGKQGVILAVALTHWPKLALILRAEILRIRETD
YVMLSHRLGNSNFYCWRHHLLPLLLPQWIVGTLLMFPHAVLHSAALSFLGFGLAPHEPSLGILLADALRYLSSGSWWLAF
FPGLILVGLVLIFDQFARSLQQLWVRLA

Sequences:

>Translated_268_residues
MTYNPNRALFRLFVSLVLLSILIVYGWLIYGAEVPMDLMARRQPPSTTYWFGTDSLGRDLWLRCFQGMTTSLQIGLIAAF
ASGLLAMLTASLCAVNKTLDYLIRGLIDSMLALPHLLLLVLICFTLGGGKQGVILAVALTHWPKLALILRAEILRIRETD
YVMLSHRLGNSNFYCWRHHLLPLLLPQWIVGTLLMFPHAVLHSAALSFLGFGLAPHEPSLGILLADALRYLSSGSWWLAF
FPGLILVGLVLIFDQFARSLQQLWVRLA
>Mature_267_residues
TYNPNRALFRLFVSLVLLSILIVYGWLIYGAEVPMDLMARRQPPSTTYWFGTDSLGRDLWLRCFQGMTTSLQIGLIAAFA
SGLLAMLTASLCAVNKTLDYLIRGLIDSMLALPHLLLLVLICFTLGGGKQGVILAVALTHWPKLALILRAEILRIRETDY
VMLSHRLGNSNFYCWRHHLLPLLLPQWIVGTLLMFPHAVLHSAALSFLGFGLAPHEPSLGILLADALRYLSSGSWWLAFF
PGLILVGLVLIFDQFARSLQQLWVRLA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=252, Percent_Identity=30.1587301587302, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1787054, Length=253, Percent_Identity=30.0395256916996, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789889, Length=237, Percent_Identity=27.8481012658228, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=30.2222222222222, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789964, Length=232, Percent_Identity=30.1724137931034, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787498, Length=248, Percent_Identity=25.4032258064516, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30002; Mature: 29871

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYNPNRALFRLFVSLVLLSILIVYGWLIYGAEVPMDLMARRQPPSTTYWFGTDSLGRDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCHHHHHH
WLRCFQGMTTSLQIGLIAAFASGLLAMLTASLCAVNKTLDYLIRGLIDSMLALPHLLLLV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LICFTLGGGKQGVILAVALTHWPKLALILRAEILRIRETDYVMLSHRLGNSNFYCWRHHL
HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCEEHHHHHH
LPLLLPQWIVGTLLMFPHAVLHSAALSFLGFGLAPHEPSLGILLADALRYLSSGSWWLAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
FPGLILVGLVLIFDQFARSLQQLWVRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYNPNRALFRLFVSLVLLSILIVYGWLIYGAEVPMDLMARRQPPSTTYWFGTDSLGRDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCHHHHHH
WLRCFQGMTTSLQIGLIAAFASGLLAMLTASLCAVNKTLDYLIRGLIDSMLALPHLLLLV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LICFTLGGGKQGVILAVALTHWPKLALILRAEILRIRETDYVMLSHRLGNSNFYCWRHHL
HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCEEHHHHHH
LPLLLPQWIVGTLLMFPHAVLHSAALSFLGFGLAPHEPSLGILLADALRYLSSGSWWLAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
FPGLILVGLVLIFDQFARSLQQLWVRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA