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The map label for this gene is ybeB [H]

Identifier: 218929687

GI number: 218929687

Start: 2928051

End: 2928368

Strand: Reverse

Name: ybeB [H]

Synonym: YPO2606

Alternate gene names: 218929687

Gene position: 2928368-2928051 (Counterclockwise)

Preceding gene: 218929688

Following gene: 218929686

Centisome position: 62.93

GC content: 48.74

Gene sequence:

>318_bases
TTGCAAGGTAAAGCGCTCCAAGAATTTGTTATCGACAAACTCGATGATTTGAAAGGCCAAGACATTATCGCTCTGGATGT
TCAGGGTAAATCCAGTATTACTGACTGCATGATTATCTGTACCGGCACATCAACCCGCCATGTTATGGCGCTGGCAGATA
ATGTGGTCCAAGAGTCACGCGCGGCGGGCATGATACCGCTGGGCATTGAAGGCCAAGGCGTCTCAGACTGGATTGTCGTT
GATCTCGGCGAAGTGATTGTGCATGTGATGCAAGAAGAAAGCCGCCGTATGTACGAACTGGAAAAACTCTGGAGCTAA

Upstream 100 bases:

>100_bases
CATCATAGCCGTTCATTAACGGTCGCCATCCTACGAGAAATCGGGTGGAACGGCACCTTAGTGAAAACGTTACGAACAAA
AACGACCCGAGGGGGAACCT

Downstream 100 bases:

>100_bases
GCGGTGAAACTGCAACTGGTAGCCGTCGGCACGAAAATGCCAGACTGGGTGCAGACAGGTTTTATCGAATATCTGCGCCG
CTTTCCCAAAGATATGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQGKALQEFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTSTRHVMALADNVVQESRAAGMIPLGIEGQGVSDWIVV
DLGEVIVHVMQEESRRMYELEKLWS

Sequences:

>Translated_105_residues
MQGKALQEFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTSTRHVMALADNVVQESRAAGMIPLGIEGQGVSDWIVV
DLGEVIVHVMQEESRRMYELEKLWS
>Mature_105_residues
MQGKALQEFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTSTRHVMALADNVVQESRAAGMIPLGIEGQGVSDWIVV
DLGEVIVHVMQEESRRMYELEKLWS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=91, Percent_Identity=39.5604395604396, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=85.7142857142857, Blast_Score=191, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 11606; Mature: 11606

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKALQEFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTSTRHVMALADNVVQESR
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
AAGMIPLGIEGQGVSDWIVVDLGEVIVHVMQEESRRMYELEKLWS
CCCCCEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGKALQEFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTSTRHVMALADNVVQESR
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
AAGMIPLGIEGQGVSDWIVVDLGEVIVHVMQEESRRMYELEKLWS
CCCCCEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]