| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929673
Identifier: 218929673
GI number: 218929673
Start: 2913972
End: 2914937
Strand: Reverse
Name: 218929673
Synonym: YPO2592
Alternate gene names: NA
Gene position: 2914937-2913972 (Counterclockwise)
Preceding gene: 218929675
Following gene: 218929672
Centisome position: 62.64
GC content: 38.82
Gene sequence:
>966_bases ATGAGAAACGTCGGTTTACATGCCCTAAAAACGTTGAGCTGCTTTTCCGCTGTTACGTTCTACTCCGCCAGTAAAACCTG TACTGAACAGTGCTTTTTAAGTGGGGAAGTCATGGGCGTTTTGTACTTTTTGTCGATCATTGCTACCCCGTTGTTTTTTA TGATCATTGGCTATATCGACTCAAATGACAAAATCGATCAGAAAGACATTTTCAGAAAATTAAAATCGATTATAACCATT ATTATTTTCTGGAACGTTCTCTTCTACTTTATCAATGAAGATGGTTTCAAACGGGGTTATTTCCTGCAAAGCTGGCTTCT GTTTAGTATCGCCATCATTTACCTCATAAACCCGATTATCTCCAAGATATTAAAAAGTAACAGGACAGCTATCATCACGC TCTCTTGCCTGGTCATTTTCTCCGTGACTATTGATCTGATCAGTGCCTTCAGTGAGCGACCATACCTTATTGATTTTCCA CAATACTTTAGGCTATGGACTTGGATTTTTTACTACATGACGGGCCGATTCCTCTGCTCGCGAATTTGTCAGAAGATGAC AAAATTGCCAAAGGTTCGTCTTGCTGCCAAGTTACTGCTGCTCCCTACATCCATCTCGATGTATTATTACGAAAGTTTCA TGTCAATTTACGTGTATAAAACCGTGAACGCGAGTTACTTCCTTGATAACTTCCACGTTTTAGTCCTCAGCTTATGTCTG TTTGTTATATTTGATAACTTTGACACTCAATATGAATGGATAAAGAAAACATTGGCGTATATCAGCCCATCAATGATTGG CGTTTATATATTGCATGATGGAATTTTCTACTTTATTGCCAGCGCATATAACTTATCAGATGTAACGTTAAGATTTACGC TGCTGTTATCCGTATTTGCCGCCTCAGTTTTATTGTCACGGGCCCTATTACTGAATAAATACACCTCGCGCTTTATCTCA TTCTGA
Upstream 100 bases:
>100_bases ATTCTGTCAATGCGCGATCTTATGTCATGCATGAGGTTTAACGTAGCAGCCCTCTCACCTTGCAGATCTCATTTAACCTT ATCGTAAGTCAAATTATTTT
Downstream 100 bases:
>100_bases TCGAAAAAGACCTGATTGTGATTATCTGGGAACGTGCAGATCTGATGGAAGGTTATCACTATCCACGTTAGTTGTTGTGG CTCGGGGTGATCACCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITI IIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFP QYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFIS F
Sequences:
>Translated_321_residues MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITI IIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFP QYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFIS F >Mature_321_residues MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITI IIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFP QYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFIS F
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37407; Mature: 37407
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYID CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCS HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH RICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHH FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFA HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASVLLSRALLLNKYTSRFISF HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYID CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCS HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH RICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHH FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFA HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASVLLSRALLLNKYTSRFISF HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA