| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929646
Identifier: 218929646
GI number: 218929646
Start: 2874814
End: 2875083
Strand: Reverse
Name: 218929646
Synonym: YPO2560
Alternate gene names: NA
Gene position: 2875083-2874814 (Counterclockwise)
Preceding gene: 218929647
Following gene: 218929643
Centisome position: 61.78
GC content: 42.96
Gene sequence:
>270_bases TTGCCGGTGTGTTGGCTGTCTTCGTTACTTGGCCCATCCGTGGGCCTCGCCTCTTGTATTGCAGTTATGGTTGGTTCTAT GCAAGCGGGATATGTTCATGCGATGACTGCTGAGCAGTTTCTTGCCGAAAATAAAAAATTGGTAGAGGAAAAGAAAAGAG CAGAGTGCAGGAAAAGAGTCATAGAAAACAGAAATAGCTTTGTTGGGTCGGTCAGTATTGTGGATCCTATAAACGTGCTG AGAGAAAATATTACCAGAAATAAATGCTAA
Upstream 100 bases:
>100_bases GTATGGGGGTGCCGTTTACTGTACTGGTCATGATCGTCAGTGTGATGGTGGTTCCCTTACTATTCCCATTCTGATTACCC GATCTCCGTAGTACTTCAAG
Downstream 100 bases:
>100_bases TTATCTCTTGTCATAATTTATAGCCTGCACAAGCAGGCTATAAAGATCAATCCAGTGAATCGAGGCTGATTTCATCCAGA GATAAACTAAAACTTGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPVCWLSSLLGPSVGLASCIAVMVGSMQAGYVHAMTAEQFLAENKKLVEEKKRAECRKRVIENRNSFVGSVSIVDPINVL RENITRNKC
Sequences:
>Translated_89_residues MPVCWLSSLLGPSVGLASCIAVMVGSMQAGYVHAMTAEQFLAENKKLVEEKKRAECRKRVIENRNSFVGSVSIVDPINVL RENITRNKC >Mature_88_residues PVCWLSSLLGPSVGLASCIAVMVGSMQAGYVHAMTAEQFLAENKKLVEEKKRAECRKRVIENRNSFVGSVSIVDPINVLR ENITRNKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9824; Mature: 9692
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVCWLSSLLGPSVGLASCIAVMVGSMQAGYVHAMTAEQFLAENKKLVEEKKRAECRKRV CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENRNSFVGSVSIVDPINVLRENITRNKC HHCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVCWLSSLLGPSVGLASCIAVMVGSMQAGYVHAMTAEQFLAENKKLVEEKKRAECRKRV CHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENRNSFVGSVSIVDPINVLRENITRNKC HHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA