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The map label for this gene is yeaW [H]

Identifier: 218929582

GI number: 218929582

Start: 2801275

End: 2802399

Strand: Reverse

Name: yeaW [H]

Synonym: YPO2493

Alternate gene names: 218929582

Gene position: 2802399-2801275 (Counterclockwise)

Preceding gene: 218929583

Following gene: 218929581

Centisome position: 60.22

GC content: 47.29

Gene sequence:

>1125_bases
ATGAGTAATCAACATCCTGACTTTGTTTTGCCAAAAGACTTTTGTGCAAACCCGCGTGAGGCTTACACCATTCCTGCTTA
TTTCTATACCCAACAGGCGGCCTTCGAGCATGAGAAAGAGAGGGTATTTACTAATAGCTGGATTTGTATGGCGCACGGCA
GTGAAGTGGCGCAGCCTAATGATTACATCACTCGTGAGATTATTGGTGAGAACATCGTTATCGTGCGTGGACGTGATAGC
GTATTGCGGGCTTTTTATAATGTCTGTCCGCATCGTGGGCACCAATTACTCAGTGGGGAAGGTAAAGCAAAGAATGTCAT
TACTTGCCCCTATCATGCCTGGACCTTCAAGCTCGACGGTGAACTGGCACATGCCCGTAACTGCGAGAATGTCACTAATT
TTGATAAAGATCGGGCGACGCTTTTCCCGGTGCGCTTAGAGGAATATGCCGGTTTTATTTTCATCAATATGAACCCAGAC
GCCGAAAGCGTGGAACAACAATTGCCGGGCTTACAGGATAAAGTTTTCGAAGCGTGCCCCGATGTGCACGAGTTGAAATT
GGCCGCTCGCTTCACCACCCGTACCCCTGCTAACTGGAAGAATATTGTCGATAACTATATGGAGTGTTATCACTGCGAGC
CTGCTCACCCAGGATTCGCCGATTCAGTGCAGATTGATCGCTACTGGCACACCATGCACGGTAATTGGTCATTACAATTT
GGCTATGCGAAACCCTCAGAAAAGTCCTTTAAATTTGAAGAGGGTGAAGAGTCCTCTTTCCACGGCTTTTGGCTATGGCC
ATGCTCAATGTTCAATGTGCCGCCACTGAAAGGCATGATGACCGTAATTTATGAGTTCCCAGTCGATGCAGAAACGACGC
TGCAAAACTATGATATTTATTTTACGAACGAAGAACTGACGGAAGACCAGAAGGCGCTTATCGAATGGTATCGCAATGTC
TTTCGCCCGGAAGATTTACGCTTGGTTGAAAGCGTTCAGAAAGGGCTGAAATCACGCGGCTATCGTGGTCAAGGGCGTAT
CATGGCTGATGATAAAGGCAGTGGGATCAGTGAGCATGGTATTGCTCACTTCCATAATCTGGTGGCGAAGGTCTTTCAAG
AGTAG

Upstream 100 bases:

>100_bases
CTGTTTTTACGTTTCTATGTCGTTGTATGCCGTGTCGGTATTCCCTAAATGTATGACTAAAAATTTTACCTATAACACCA
AGATAGCCAGAGGTGACATT

Downstream 100 bases:

>100_bases
CCTATTATTATGGCCCACAGTGAGCCGCTGTGGGTCTTCTCTGATAGCGTAAGCAAATAGCTCGCGCAGACACGCTTAAA
ATACCGGGGTTTTCTATGGC

Product: putative dioxygenase alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSNQHPDFVLPKDFCANPREAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGRDS
VLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDRATLFPVRLEEYAGFIFINMNPD
AESVEQQLPGLQDKVFEACPDVHELKLAARFTTRTPANWKNIVDNYMECYHCEPAHPGFADSVQIDRYWHTMHGNWSLQF
GYAKPSEKSFKFEEGEESSFHGFWLWPCSMFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNV
FRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHNLVAKVFQE

Sequences:

>Translated_374_residues
MSNQHPDFVLPKDFCANPREAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGRDS
VLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDRATLFPVRLEEYAGFIFINMNPD
AESVEQQLPGLQDKVFEACPDVHELKLAARFTTRTPANWKNIVDNYMECYHCEPAHPGFADSVQIDRYWHTMHGNWSLQF
GYAKPSEKSFKFEEGEESSFHGFWLWPCSMFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNV
FRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHNLVAKVFQE
>Mature_373_residues
SNQHPDFVLPKDFCANPREAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGRDSV
LRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDRATLFPVRLEEYAGFIFINMNPDA
ESVEQQLPGLQDKVFEACPDVHELKLAARFTTRTPANWKNIVDNYMECYHCEPAHPGFADSVQIDRYWHTMHGNWSLQFG
YAKPSEKSFKFEEGEESSFHGFWLWPCSMFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNVF
RPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHNLVAKVFQE

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=374, Percent_Identity=82.620320855615, Blast_Score=681, Evalue=0.0,
Organism=Escherichia coli, GI1788888, Length=155, Percent_Identity=29.0322580645161, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 43264; Mature: 43133

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQHPDFVLPKDFCANPREAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPN
CCCCCCCEECCHHHCCCCCCCEEEEHHEEEHHHHHHHHHHHEEECCEEEEECCCCCCCCC
DYITREIIGENIVIVRGRDSVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDG
HHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCCEEECCCEEEEEEECC
ELAHARNCENVTNFDKDRATLFPVRLEEYAGFIFINMNPDAESVEQQLPGLQDKVFEACP
CCHHCCCCCCCCCCCCCCEEEEEEEEHHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHCC
DVHELKLAARFTTRTPANWKNIVDNYMECYHCEPAHPGFADSVQIDRYWHTMHGNWSLQF
CHHHHHEEEHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHEEEEECCCEEEEE
GYAKPSEKSFKFEEGEESSFHGFWLWPCSMFNVPPLKGMMTVIYEFPVDAETTLQNYDIY
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEEECCCCCHHHHCCEEEE
FTNEELTEDQKALIEWYRNVFRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHG
ECCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHH
IAHFHNLVAKVFQE
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SNQHPDFVLPKDFCANPREAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPN
CCCCCCEECCHHHCCCCCCCEEEEHHEEEHHHHHHHHHHHEEECCEEEEECCCCCCCCC
DYITREIIGENIVIVRGRDSVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDG
HHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCCEEECCCEEEEEEECC
ELAHARNCENVTNFDKDRATLFPVRLEEYAGFIFINMNPDAESVEQQLPGLQDKVFEACP
CCHHCCCCCCCCCCCCCCEEEEEEEEHHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHCC
DVHELKLAARFTTRTPANWKNIVDNYMECYHCEPAHPGFADSVQIDRYWHTMHGNWSLQF
CHHHHHEEEHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHEEEEECCCEEEEE
GYAKPSEKSFKFEEGEESSFHGFWLWPCSMFNVPPLKGMMTVIYEFPVDAETTLQNYDIY
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEEECCCCCHHHHCCEEEE
FTNEELTEDQKALIEWYRNVFRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHG
ECCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHH
IAHFHNLVAKVFQE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]