Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218929562
Identifier: 218929562
GI number: 218929562
Start: 2774518
End: 2775456
Strand: Reverse
Name: 218929562
Synonym: YPO2473
Alternate gene names: NA
Gene position: 2775456-2774518 (Counterclockwise)
Preceding gene: 218929563
Following gene: 218929561
Centisome position: 59.64
GC content: 48.99
Gene sequence:
>939_bases ATGATGAGACATGCCCCACCAGCCAGCGTTGCCCAATTGTTCGCCGATTACCAAAAACGGACGGCTCACAACACCTTTTC CACCGGTCGGCTCGAATTCACGGGGGTCGGTGACAAGGATGTTTATAACATCACCGCGCCATTTACCTCTGCCGGGCAGG TTGTGATCGCCGGACGTGTTGAAGCGAGAGACTCCGAGCATTCGACTATTGTGTTTTTCAGTGAACAGCAAGGGCAATGG GCGCCTGTTGAAAACGCACCGACGTTCCAATTACAGGATCCTTTTTTCACCAGGATTGAGGATGAGCTTATTTTGGGCGG GGTTGAAATTAATCCACACCCTGATAACCCAAGGCAACTCATCTGGCACACCGTATTTTTCCGTGGGCGAGATATTCACT CATTAACGCGTTTCGCCTCCGGCCCACCGGGGATGAAAGATATCCGTTTGTGCCATATTCAGCAGGGGCGCATCGGGGTA TTTACCCGACCACAAGGTAAAATAGGCGGTAGAGGCACTATTGGGTATGTTGAAATAAACAACCTGGAGGCGCTAACGCC AGAAACTATCACCAGCGCCGAACTGTTCGAGCAGCAGTTTAATTCCGAAGAATGGGGCGGCGTCAACGAAACGCATTTAC TTTGCGATGGCACCATTGGGTTACTTTCCCATATTGCCTGTTTCGATCAACATGGAAGGAGACACTACTACCCGGGCGTA TTTATCTTTAACCCGGACACCAAAAACTATACGCCAATAAAAATTATTGCAGCCAGAGATAATTTTCTACCCGGTGCAAC TAAACGCCCGGACTTAGTGGATGTTATTTTTCCGGGCGGCTTAATTGTATTACCTAACAACGGCTGGCGATTATATGTTG GTGCCAGCGATGCGGAAGCGCACTGGATTGATATTGAAGATCCTTTTAGCGGATTTTAA
Upstream 100 bases:
>100_bases ACGGTGCGGCGGATGAATGTATGTGCCTGGCTGAAATGCCGCTGGCTCAACTGTGGCAGCACCTGTCGGTGTAATTACGG GATAAAAAAATAAGGCTTCT
Downstream 100 bases:
>100_bases TTACCAGAAAATCTAAATTGCGTTTTTAACTCGATTTATAGAAAAAACCTAATATCAATTAGATTGGGTGGAGTTCCCAT TATTTATCGATTGGGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFSEQQGQW APVENAPTFQLQDPFFTRIEDELILGGVEINPHPDNPRQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGV FTRPQGKIGGRGTIGYVEINNLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV FIFNPDTKNYTPIKIIAARDNFLPGATKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF
Sequences:
>Translated_312_residues MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFSEQQGQW APVENAPTFQLQDPFFTRIEDELILGGVEINPHPDNPRQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGV FTRPQGKIGGRGTIGYVEINNLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV FIFNPDTKNYTPIKIIAARDNFLPGATKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF >Mature_312_residues MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFSEQQGQW APVENAPTFQLQDPFFTRIEDELILGGVEINPHPDNPRQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGV FTRPQGKIGGRGTIGYVEINNLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV FIFNPDTKNYTPIKIIAARDNFLPGATKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34834; Mature: 34834
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE EARDSEHSTIVFFSEQQGQWAPVENAPTFQLQDPFFTRIEDELILGGVEINPHPDNPRQL ECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCEEEEEEEEECCCCCCHHHE IWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGVFTRPQGKIGGRGTIGYVEIN EEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEC NLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEECCEE FIFNPDTKNYTPIKIIAARDNFLPGATKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEA EEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCE HWIDIEDPFSGF EEEECCCCCCCC >Mature Secondary Structure MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE EARDSEHSTIVFFSEQQGQWAPVENAPTFQLQDPFFTRIEDELILGGVEINPHPDNPRQL ECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCEEEEEEEEECCCCCCHHHE IWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGVFTRPQGKIGGRGTIGYVEIN EEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEC NLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEECCEE FIFNPDTKNYTPIKIIAARDNFLPGATKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEA EEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCE HWIDIEDPFSGF EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA