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The map label for this gene is 218928987

Identifier: 218928987

GI number: 218928987

Start: 2115626

End: 2116141

Strand: Reverse

Name: 218928987

Synonym: YPO1868

Alternate gene names: NA

Gene position: 2116141-2115626 (Counterclockwise)

Preceding gene: 218928990

Following gene: 218928983

Centisome position: 45.47

GC content: 46.51

Gene sequence:

>516_bases
ATGGATAAACGAGGAATAACGAGCAGAACGCAGGCTAACCGGGAAAAAACTTTCCTTTCTCGCGTTTATCGCTGGGGATA
TGAACGCGGAATAGTGAAAGGCAATCCATGCAGAGGGGCCAAACAATTTACGGAGAAAGCCAGAGACCGCTATATTACAG
ATGAGGAATACGACGCAGTGTATCAAGTCGCACCTGATGTTGTCCGAGTTGCAATGGAAATAGCCTATCTGTGTCTCGCC
CGGCAAGCGGATGTCCTTGCTTTGCGTCGTGATCAGCTCAGAGAACCCGGGATCTATATCAAACAGGGTAAGACGGCAGC
CAGGCAGATTAAAGCATGGTCTGAACGGTTACGTGATGCCATAACACTGGCTGAGTCCCTTCCCCTGAAGTCAGGTATAA
GTAGTGTGTATATCATCCATCAACGTACAGGTTTACGGTATACGCGTGATGGATTTAATAGTAAATGGCACAAAGCCAGG
GAAGTCGCAAAAAACATATCCAAAGTTAGATTTTAA

Upstream 100 bases:

>100_bases
TCAGCATCCTGTTCAATTTGAACCTGAATCTCTCAAATTGCTGCCAGTCTTTGGAGAAATGTCCCCTGACAATATAAGAT
CCGAACATATAAGAAAGTAT

Downstream 100 bases:

>100_bases
TTTCACCTTCCATGACCTTAAAGCCAAGGGTATTTCTGATCTTGAAGGGACACTCAGTGAAAAACAGGCAATTTCAGGGC
ATAAAAACATGGGGCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase; Site-Specific Recombinase Phage Integrase Family; Phage-Related Integrase; Phage Integrase Family Site Specific Recombinase; Integrase Protein; Site-Specific Recombinase; Integrase Partial Gene; Integrase Prophage; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDKRGITSRTQANREKTFLSRVYRWGYERGIVKGNPCRGAKQFTEKARDRYITDEEYDAVYQVAPDVVRVAMEIAYLCLA
RQADVLALRRDQLREPGIYIKQGKTAARQIKAWSERLRDAITLAESLPLKSGISSVYIIHQRTGLRYTRDGFNSKWHKAR
EVAKNISKVRF

Sequences:

>Translated_171_residues
MDKRGITSRTQANREKTFLSRVYRWGYERGIVKGNPCRGAKQFTEKARDRYITDEEYDAVYQVAPDVVRVAMEIAYLCLA
RQADVLALRRDQLREPGIYIKQGKTAARQIKAWSERLRDAITLAESLPLKSGISSVYIIHQRTGLRYTRDGFNSKWHKAR
EVAKNISKVRF
>Mature_171_residues
MDKRGITSRTQANREKTFLSRVYRWGYERGIVKGNPCRGAKQFTEKARDRYITDEEYDAVYQVAPDVVRVAMEIAYLCLA
RQADVLALRRDQLREPGIYIKQGKTAARQIKAWSERLRDAITLAESLPLKSGISSVYIIHQRTGLRYTRDGFNSKWHKAR
EVAKNISKVRF

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19842; Mature: 19842

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRGITSRTQANREKTFLSRVYRWGYERGIVKGNPCRGAKQFTEKARDRYITDEEYDAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
YQVAPDVVRVAMEIAYLCLARQADVLALRRDQLREPGIYIKQGKTAARQIKAWSERLRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
ITLAESLPLKSGISSVYIIHQRTGLRYTRDGFNSKWHKAREVAKNISKVRF
HHHHHHCCHHCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKRGITSRTQANREKTFLSRVYRWGYERGIVKGNPCRGAKQFTEKARDRYITDEEYDAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
YQVAPDVVRVAMEIAYLCLARQADVLALRRDQLREPGIYIKQGKTAARQIKAWSERLRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
ITLAESLPLKSGISSVYIIHQRTGLRYTRDGFNSKWHKAREVAKNISKVRF
HHHHHHCCHHCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA