Click here to switch to the map view.

The map label for this gene is fliT [H]

Identifier: 218928958

GI number: 218928958

Start: 2084182

End: 2084544

Strand: Reverse

Name: fliT [H]

Synonym: YPO1839

Alternate gene names: 218928958

Gene position: 2084544-2084182 (Counterclockwise)

Preceding gene: 218928959

Following gene: 218928957

Centisome position: 44.79

GC content: 41.32

Gene sequence:

>363_bases
ATGGAACGTCACCAGCATCTTTTGTCCGAATATCAACAAATCCTAACTCTCAGTGAGCAAATGCTTATGTTGGCTACTGT
GGAAAACTGGAATGCGCTGGTTGATCTGGAAATGACTTATCTCAAAGCCGTTGAAAATACAGCTAATATCACTATTTCCT
CTTGTACATCACCAGTATTGCAAGAATTACTGCGCCAAAAATTGAGATCCATATTGGAGAATGAGATAGAAATTAAGCGG
TTACTGCAACGTCGTTTAGATAAATTAAGTGAATTGGTGGGGCAATCTACCCGCCAACAGGCAGTTAATCGTACTTATGG
TCAGTTCCCCGATCAGGCACTGCTGCTGGGTGAAACACAATAA

Upstream 100 bases:

>100_bases
GACGAACAAGCAATTAATGAAGTGTCTGCCTTGCTCGAAAATATTGCAGATGCGTGGCGGCAGATCGGCCCGAATTATCA
ACCCAATTAGGACCCATTTA

Downstream 100 bases:

>100_bases
AATACGGAGTATCAACGTCATGTTATACCTGTAATATTTCAAGCTGCATGTACGTTGGCTACATTCAATAACTCGAATTA
TTTAGGGTATATATCCGTTC

Product: flagellar biosynthesis protein FliT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MERHQHLLSEYQQILTLSEQMLMLATVENWNALVDLEMTYLKAVENTANITISSCTSPVLQELLRQKLRSILENEIEIKR
LLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGETQ

Sequences:

>Translated_120_residues
MERHQHLLSEYQQILTLSEQMLMLATVENWNALVDLEMTYLKAVENTANITISSCTSPVLQELLRQKLRSILENEIEIKR
LLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGETQ
>Mature_120_residues
MERHQHLLSEYQQILTLSEQMLMLATVENWNALVDLEMTYLKAVENTANITISSCTSPVLQELLRQKLRSILENEIEIKR
LLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGETQ

Specific function: Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein fliD. As a transcriptional regulator, acts as an anti-flhDC factor; it directly binds flhC, thus

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm, cytosol [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliT family [H]

Homologues:

Organism=Escherichia coli, GI1788235, Length=107, Percent_Identity=44.8598130841121, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008622 [H]

Pfam domain/function: PF05400 FliT [H]

EC number: NA

Molecular weight: Translated: 13912; Mature: 13912

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERHQHLLSEYQQILTLSEQMLMLATVENWNALVDLEMTYLKAVENTANITISSCTSPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEHHHHCHHHH
QELLRQKLRSILENEIEIKRLLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGETQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCC
>Mature Secondary Structure
MERHQHLLSEYQQILTLSEQMLMLATVENWNALVDLEMTYLKAVENTANITISSCTSPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEHHHHCHHHH
QELLRQKLRSILENEIEIKRLLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGETQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA