| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928937
Identifier: 218928937
GI number: 218928937
Start: 2064772
End: 2065191
Strand: Reverse
Name: 218928937
Synonym: YPO1817
Alternate gene names: NA
Gene position: 2065191-2064772 (Counterclockwise)
Preceding gene: 218928938
Following gene: 218928930
Centisome position: 44.38
GC content: 45.0
Gene sequence:
>420_bases ATGGCTATCTATCCCGCCTATGTTCACGTTGATAATGATGGCTCGGCAAGCGGTTATTTCCCCGATGTCAAAGGCTGTAT TTTTGCCATCAATGCCGGGGAGGATTTATTTGCAGAAGCATCAAGCGCCCTGGATGCACACTTTGAAGCTTTGGTGTCTG AAGGTATCGAAATTCCTGAAGCTCATGACATGCCTTACCACGTTTACCGTAACCCATGCGATTACGCTGATGGCGGACAG TGGTATAACGTGAATATTGATATGTCGAAATATGATGGAAAAGTTGAACGAATTAACGTCACTCTTCCGCACCGGCTGAT TCATCAAATCGATACTATTGTTAAAGTGCGTCCCGAGTATGCCAGCCGAAGCAATTTTCTAGCCGAAGCAGCACGTAAAG AATTACAGAAATTGGCGTAA
Upstream 100 bases:
>100_bases AGGATGTTAAACCGGGAACCCTCCGGCAAATTCTGAAAGATGCAAACCTTAGTTAACAAAGCGCCCTCTAGGGTGCTATT AAGCAACGCAGGAGTTTTAT
Downstream 100 bases:
>100_bases CCCTTCTCCTGTCGCTGCTTATCGCCCCGTTTCGGCGGGGTTTACCCCCCCTTTTCTGACCTCTCGTAACTATATATTTT TAGGTGATTTTTAATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MAIYPAYVHVDNDGSASGYFPDVKGCIFAINAGEDLFAEASSALDAHFEALVSEGIEIPEAHDMPYHVYRNPCDYADGGQ WYNVNIDMSKYDGKVERINVTLPHRLIHQIDTIVKVRPEYASRSNFLAEAARKELQKLA
Sequences:
>Translated_139_residues MAIYPAYVHVDNDGSASGYFPDVKGCIFAINAGEDLFAEASSALDAHFEALVSEGIEIPEAHDMPYHVYRNPCDYADGGQ WYNVNIDMSKYDGKVERINVTLPHRLIHQIDTIVKVRPEYASRSNFLAEAARKELQKLA >Mature_138_residues AIYPAYVHVDNDGSASGYFPDVKGCIFAINAGEDLFAEASSALDAHFEALVSEGIEIPEAHDMPYHVYRNPCDYADGGQW YNVNIDMSKYDGKVERINVTLPHRLIHQIDTIVKVRPEYASRSNFLAEAARKELQKLA
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15550; Mature: 15418
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYPAYVHVDNDGSASGYFPDVKGCIFAINAGEDLFAEASSALDAHFEALVSEGIEIPE CCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC AHDMPYHVYRNPCDYADGGQWYNVNIDMSKYDGKVERINVTLPHRLIHQIDTIVKVRPEY CCCCCEEEECCCCCCCCCCEEEEEEEEHHCCCCEEEEEEEECHHHHHHHHHHHHEECCCC ASRSNFLAEAARKELQKLA CCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIYPAYVHVDNDGSASGYFPDVKGCIFAINAGEDLFAEASSALDAHFEALVSEGIEIPE CEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC AHDMPYHVYRNPCDYADGGQWYNVNIDMSKYDGKVERINVTLPHRLIHQIDTIVKVRPEY CCCCCEEEECCCCCCCCCCEEEEEEEEHHCCCCEEEEEEEECHHHHHHHHHHHHEECCCC ASRSNFLAEAARKELQKLA CCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA