| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928823
Identifier: 218928823
GI number: 218928823
Start: 1932093
End: 1933082
Strand: Reverse
Name: 218928823
Synonym: YPO1695
Alternate gene names: NA
Gene position: 1933082-1932093 (Counterclockwise)
Preceding gene: 218928824
Following gene: 218928822
Centisome position: 41.54
GC content: 42.22
Gene sequence:
>990_bases ATGTTATCCATCACCAGAGAAATCACAACCATAACGAACACTCCCAAGTATTGGCTTAGCTGGCGAACATTACCTATATT ATGGCTATTTTATGTAGGGAATACATTAGCCTGTACCTTTAGCTCCCCCACCGTTACGCTCCCACCCAATTCGTCATTTA ACGTCAATACCCTAACAGAAAGTGGCAGCGGCACCATTGCAATGCTCTGTACTGGGACCGGTGTGAGCCTATTGGCTTCT CCTGTATTAAATGCAACTGTAGCCAGTACCACCAATACCTTGAAGCTAAAAAATTCAGCGGGTGACGTTATTCCTTATAC AATTTATTCTGACGCAGGTTATAACAATGCCATTGCTATAGGCAACGTGATAAATTATGCCGGCAATAGCAGCTTACTCA TTGTGACGCTTTTCCAAATTAGTGCTAACCTCCCTATTTATATTCGAACTGGTAGCAATAATGCTATTAATGTTAACGTC AGTGCCGGGACATATACCGATGTCATTAATTTAAACTGGAATTACGATTTATGTGCTATCTCTCTATTTAGCCTCTGCCT TGGCGGCCGCTTCAGTGGGACAGCGACCTCTACCGTGACAGTCAAATTAACGGTCAGTAATGACTGCGTCATTAACAGTG CCCCCAATGTTAATTTCGGCAGTTATGCATTAATTACCCAGTTTGCTCCTGTTAATCAAAATATCTCTGCCACCTGCACA AAAAATGCTACTTTCACGACCTACATAACCAATGGAAATAATTTTGTCGCGCCATGGCCTCGAATGAAATTAACCTCTGG AACTGACTATTTACAGTATCAACTGTATCAAGGGGCTGGAGTCATCCCGTGGAATGTAACGAATAAAAGAACAAGTACCG CGACAGGCACTCAGCAGTTGATCCCTTATAATGCGGTCATTAATCCGCAGCAAGCACAAAAAACGGTGGGAACTTATCAA GATAATGTGAGTGTTGTATTGGAATATTGA
Upstream 100 bases:
>100_bases ATTGACTGAGGTGACAACGGTTATTGACACTTAGCACCGAGAACAGATTTGAATGCAGCTTGAAGGACGACAGGTATAAA CTTCATATGAGGAACGACGA
Downstream 100 bases:
>100_bases ATTGAAGAGCCGTGCATACCTGAATATATCTCAGTGTTATGTTTCCAAGGGCTATTTGGCTTCCAAGGGTTATTTTTCCG AATACTCGTTCGCTTCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Spore Coat U Domain Protein; CsuE Protein; Type I Pili Chaperone-Usher Pili Assembly System); Spore Coat Protein U Domain-Contain Protein; Sigma-Fimbriae Tip Adhesin; Type 1 Pili Protein CsuE; Type I Pilus Protein CsuE; Spore Coat U; Fimbrial Adhesin; Fimbrial Protein; Lipoprotein
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MLSITREITTITNTPKYWLSWRTLPILWLFYVGNTLACTFSSPTVTLPPNSSFNVNTLTESGSGTIAMLCTGTGVSLLAS PVLNATVASTTNTLKLKNSAGDVIPYTIYSDAGYNNAIAIGNVINYAGNSSLLIVTLFQISANLPIYIRTGSNNAINVNV SAGTYTDVINLNWNYDLCAISLFSLCLGGRFSGTATSTVTVKLTVSNDCVINSAPNVNFGSYALITQFAPVNQNISATCT KNATFTTYITNGNNFVAPWPRMKLTSGTDYLQYQLYQGAGVIPWNVTNKRTSTATGTQQLIPYNAVINPQQAQKTVGTYQ DNVSVVLEY
Sequences:
>Translated_329_residues MLSITREITTITNTPKYWLSWRTLPILWLFYVGNTLACTFSSPTVTLPPNSSFNVNTLTESGSGTIAMLCTGTGVSLLAS PVLNATVASTTNTLKLKNSAGDVIPYTIYSDAGYNNAIAIGNVINYAGNSSLLIVTLFQISANLPIYIRTGSNNAINVNV SAGTYTDVINLNWNYDLCAISLFSLCLGGRFSGTATSTVTVKLTVSNDCVINSAPNVNFGSYALITQFAPVNQNISATCT KNATFTTYITNGNNFVAPWPRMKLTSGTDYLQYQLYQGAGVIPWNVTNKRTSTATGTQQLIPYNAVINPQQAQKTVGTYQ DNVSVVLEY >Mature_329_residues MLSITREITTITNTPKYWLSWRTLPILWLFYVGNTLACTFSSPTVTLPPNSSFNVNTLTESGSGTIAMLCTGTGVSLLAS PVLNATVASTTNTLKLKNSAGDVIPYTIYSDAGYNNAIAIGNVINYAGNSSLLIVTLFQISANLPIYIRTGSNNAINVNV SAGTYTDVINLNWNYDLCAISLFSLCLGGRFSGTATSTVTVKLTVSNDCVINSAPNVNFGSYALITQFAPVNQNISATCT KNATFTTYITNGNNFVAPWPRMKLTSGTDYLQYQLYQGAGVIPWNVTNKRTSTATGTQQLIPYNAVINPQQAQKTVGTYQ DNVSVVLEY
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35389; Mature: 35389
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSITREITTITNTPKYWLSWRTLPILWLFYVGNTLACTFSSPTVTLPPNSSFNVNTLTE CCEEEEEEEEECCCCCEEEEECHHHHHEEEECCCEEEEEECCCEEEECCCCCEEEEEEEE SGSGTIAMLCTGTGVSLLASPVLNATVASTTNTLKLKNSAGDVIPYTIYSDAGYNNAIAI CCCCEEEEEEECCCHHHHHHHHHCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCEEEE GNVINYAGNSSLLIVTLFQISANLPIYIRTGSNNAINVNVSAGTYTDVINLNWNYDLCAI CCEEECCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCHHHH SLFSLCLGGRFSGTATSTVTVKLTVSNDCVINSAPNVNFGSYALITQFAPVNQNISATCT HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEE KNATFTTYITNGNNFVAPWPRMKLTSGTDYLQYQLYQGAGVIPWNVTNKRTSTATGTQQL CCCEEEEEEECCCEEECCCCCEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHE IPYNAVINPQQAQKTVGTYQDNVSVVLEY EEEEEEECHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MLSITREITTITNTPKYWLSWRTLPILWLFYVGNTLACTFSSPTVTLPPNSSFNVNTLTE CCEEEEEEEEECCCCCEEEEECHHHHHEEEECCCEEEEEECCCEEEECCCCCEEEEEEEE SGSGTIAMLCTGTGVSLLASPVLNATVASTTNTLKLKNSAGDVIPYTIYSDAGYNNAIAI CCCCEEEEEEECCCHHHHHHHHHCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCEEEE GNVINYAGNSSLLIVTLFQISANLPIYIRTGSNNAINVNVSAGTYTDVINLNWNYDLCAI CCEEECCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCHHHH SLFSLCLGGRFSGTATSTVTVKLTVSNDCVINSAPNVNFGSYALITQFAPVNQNISATCT HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEE KNATFTTYITNGNNFVAPWPRMKLTSGTDYLQYQLYQGAGVIPWNVTNKRTSTATGTQQL CCCEEEEEEECCCEEECCCCCEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHE IPYNAVINPQQAQKTVGTYQDNVSVVLEY EEEEEEECHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA