Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yebV [H]
Identifier: 218928822
GI number: 218928822
Start: 1931646
End: 1931885
Strand: Reverse
Name: yebV [H]
Synonym: YPO1694
Alternate gene names: 218928822
Gene position: 1931885-1931646 (Counterclockwise)
Preceding gene: 218928823
Following gene: 218928820
Centisome position: 41.51
GC content: 40.83
Gene sequence:
>240_bases ATGGGGAAAAGCATCGTAAAAATCAGGCAGTTTGAAGTTGATGATGCAGAATTATCATCACAGACAAAAGGTGAGCATAC GCTCAGTATTCCATGTAAATCAGACCCTGATTTATGTATGCAGCTAGATGGATGGGATGAAAACACCAGTATTCCTGCTA TCTTGGATGGCAAGGATACGCTGTTATACAAGCAACATTACGATCAACATCAAGATGCCTGGGTTATGAAGGTAACCTGA
Upstream 100 bases:
>100_bases TTTTAGAGAATACCTCTGGCGATTTTCTTCAGCTCAGCTATTCTCAATAAGGCTGTCAATCTGGTCATACCTCCTGCCAC ACTATTAGTAAGGAGCCTTT
Downstream 100 bases:
>100_bases ACATGGCGATAAGAAGATCCGTCAACCCATAGTTCATGCTTATGAGTGACGGTTTCTTCTCTTGGAACGTGGCGAAGCTA ACGGACTAAAACAACGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MGKSIVKIRQFEVDDAELSSQTKGEHTLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDTLLYKQHYDQHQDAWVMKVT
Sequences:
>Translated_79_residues MGKSIVKIRQFEVDDAELSSQTKGEHTLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDTLLYKQHYDQHQDAWVMKVT >Mature_78_residues GKSIVKIRQFEVDDAELSSQTKGEHTLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDTLLYKQHYDQHQDAWVMKVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081986, Length=77, Percent_Identity=57.1428571428571, Blast_Score=106, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009950 - ProDom: PD060427 [H]
Pfam domain/function: PF07351 DUF1480 [H]
EC number: NA
Molecular weight: Translated: 8994; Mature: 8863
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSIVKIRQFEVDDAELSSQTKGEHTLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDT CCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCE LLYKQHYDQHQDAWVMKVT EEEECCCCCCCCEEEEEEC >Mature Secondary Structure GKSIVKIRQFEVDDAELSSQTKGEHTLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDT CCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCE LLYKQHYDQHQDAWVMKVT EEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]