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The map label for this gene is nudJ [H]

Identifier: 218928775

GI number: 218928775

Start: 1865027

End: 1865473

Strand: Reverse

Name: nudJ [H]

Synonym: YPO1639

Alternate gene names: 218928775

Gene position: 1865473-1865027 (Counterclockwise)

Preceding gene: 218928776

Following gene: 218928774

Centisome position: 40.09

GC content: 49.44

Gene sequence:

>447_bases
ATGTTTAAACCGCATGTTACTGTCGCCTGTGTCGTTCATACTCAGGGGAAATTTCTGATCGTTGAAGAAACCATCAACAA
TGAAAAACGCTGGAACCAGCCAGCCGGTCATCTGGAAGCCGATGAAACCCTCATTCAGGCAGCAGAACGCGAGTTATGGG
AAGAAACGGGGATTCGCGCGACACCACAACATTTTTTACGGATGCACCAATGGCTGGCACCGGACAATACCCCCTTTTTA
CGTTTCGCTTTTGTCATTGAATTACCCGCCCAACTGCCAACACAGCCCCATGACAGCGATATTGATCGTTGCCTGTGGCT
AAGTGCCGATGAAATATTGCAATCGACGCATTTACGCTCACCGTTGGTTGCGGAGAGTATCCGTTGTTACCTGCAGCCAG
AGCGCTATTCGCTTGATCTTATAGGGACCTTTAACTGGCCGCTCTGA

Upstream 100 bases:

>100_bases
ACCGCACACGTTGGCTTCCCTACCCTGCGCCTGATTCGTTTTAGTATGGGAAATTTAAGCCTTGGCAACTTACAGCCCGG
CGAATGGAAGGAGATAACTG

Downstream 100 bases:

>100_bases
CCCTCAGCCAGATTTATTCAGGTAATTTACCCCGGAGAGTGAATCGGCAATGCACCGTTGCGGGCAACGTGATAAAATCC
GGCGCTTGTTTTTATAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRATPQHFLRMHQWLAPDNTPFL
RFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRSPLVAESIRCYLQPERYSLDLIGTFNWPL

Sequences:

>Translated_148_residues
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRATPQHFLRMHQWLAPDNTPFL
RFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRSPLVAESIRCYLQPERYSLDLIGTFNWPL
>Mature_148_residues
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRATPQHFLRMHQWLAPDNTPFL
RFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRSPLVAESIRCYLQPERYSLDLIGTFNWPL

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=148, Percent_Identity=75, Blast_Score=241, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17197; Mature: 17197

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRA
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TPQHFLRMHQWLAPDNTPFLRFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRS
CHHHHHHHHHHCCCCCCCCEEEEEEEECHHHCCCCCCCCCCHHEEECCHHHHHHHHCCCC
PLVAESIRCYLQPERYSLDLIGTFNWPL
CHHHHHHHHEECCCCEEEEEEEECCCCC
>Mature Secondary Structure
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRA
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TPQHFLRMHQWLAPDNTPFLRFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRS
CHHHHHHHHHHCCCCCCCCEEEEEEEECHHHCCCCCCCCCCHHEEECCHHHHHHHHCCCC
PLVAESIRCYLQPERYSLDLIGTFNWPL
CHHHHHHHHEECCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA