| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218928693
Identifier: 218928693
GI number: 218928693
Start: 1766721
End: 1767155
Strand: Reverse
Name: 218928693
Synonym: YPO1552
Alternate gene names: NA
Gene position: 1767155-1766721 (Counterclockwise)
Preceding gene: 218928694
Following gene: 218928690
Centisome position: 37.97
GC content: 38.85
Gene sequence:
>435_bases ATGGCGCGGCTCGAGCCTACATGGATGTATTTACGGCGTCTTTACGATCTGCCTGTTCTCTCCGTCGCGGGCACTTTGTC AATAACCTCACTTATCTTTTTAATTTCTTTCTCTACTCTTGCAGCAGAAGTTAATCAGAATAAAGTGCAACAAAAAAACA ATTTAGAAAATTTTGCATTAAGCATTTGTTTAGCAGAGGGTTTTCCTGATGGAGAAATAAATAGCGAGGCCTTTTCTGCG GTCGGTGCTTATGTGGAGTTAGGCGCTTATCCTGTAGAAGCGTATGAAGAAGTTAGCGAACTTGCCAAAAAATTCCTAGA AAAGAAATATATCAGCAAAAATGGCGAATCAAAACTCACCGTTATGAAGTGTATCGATTTATCTCAAAGTAGTGAGCTCA GTGCTATTAAAGATAAGTATACCCGTCATATTTAA
Upstream 100 bases:
>100_bases GGTGCCCAATTATGGCTGCTAAAATAATATCACTTATCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAG GATAGGCGTCCGCGCCAAGG
Downstream 100 bases:
>100_bases CGTGCATATGCGTTGGCTGTCCTCGTTCACCCCAGTCACTTACCTGTGTAAGCTTCTGGGGATTCTCTCAGTTGCCGCCT TCCTGAAGCTCGAATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLAEGFPDGEINSEAFSA VGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI
Sequences:
>Translated_144_residues MARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLAEGFPDGEINSEAFSA VGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI >Mature_143_residues ARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLAEGFPDGEINSEAFSAV GAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16096; Mature: 15964
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFAL CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH SICLAEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLT HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMKCIDLSQSSELSAIKDKYTRHI HHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure ARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFAL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH SICLAEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLT HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMKCIDLSQSSELSAIKDKYTRHI HHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA