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The map label for this gene is ybhK [C]

Identifier: 218928322

GI number: 218928322

Start: 1305398

End: 1306321

Strand: Reverse

Name: ybhK [C]

Synonym: YPO1158

Alternate gene names: 218928322

Gene position: 1306321-1305398 (Counterclockwise)

Preceding gene: 218928329

Following gene: 218928319

Centisome position: 28.07

GC content: 50.32

Gene sequence:

>924_bases
ATGCGAAATCGCACATTAGCGGATTTGGAACGGGTCGTTGCTCTGGGCGGAGGCCATGGTTTGGGGCGGGTAATGTCGTC
TCTCTCCTCCTTAGGCTCTCGCCTGACAGGCATTGTTACCACCACCGATAATGGCGGTTCAACTGGGCGGATACGCCGCT
CAGAGGGGGGAATTGCCTGGGGAGATACTCGCAATTGCCTTAATCAGTTGATTACCGAGCCAAGTGTCGCCTCCGCGATG
TTCGAATACCGTTTTACCGGTAATGGTGAGCTGGCAGGGCATAATTTGGGTAACTTGATGCTGAAAGCATTAGATCACCT
GAGCATTCGCCCCATTGAAGCGATCAATTTGGTGCGTAGCTTGCTAAAAGTGGATGCCTTGTTGATCCCAATGTCCGAAC
AACCGGTAGATTTGATGGCTATTGACCATGAAGGGCACCCTATTTATGGTGAAGTGAATATCGATCAATTGGCGCAGATG
CCACAAGAAATGTTGCTATCGCCCCCTGTACACGCCACCCGAGAAGCCGTCGAAGCCATTAATCAGGCGGATGTTATTTT
GATTGGCCCCGGCAGTTTTCTAACCAGTCTAATGCCATTACTGCTGCTGGATGAGTTAACTCAGGCATTGCGCCGCAGCT
CTGCCAGTATGATTTACATTGGGAATCTGGGCCGCGAATTAAGCCCCGCCGCCGCTGCGCTGTCATTACAAGACAAACTG
ACCATCATGGAAAGCAAGATTGGCCGTAAAATCATTGATGCCGTTATTGTCAGCCCAACAATCGATATCAGTGGCGTAAA
AGACCGAATTATTGTCCAACAACCACTGGAAGCAAAAGATATTCCTCACCGCCATGACCGCGAGTTATTGCGTCAGGCGT
TGGAAAACACCTTGCAACAGTTGAACGGTGCAGACTCGGTGTAA

Upstream 100 bases:

>100_bases
ACGCCATTAGCATGGCAGCCAGGTTCATTAGCGTTGCAACACAAGATAAAAACTGTATGCGCGATAATCGCCAGGCACCG
AATATAACAACAGGAGAAAT

Downstream 100 bases:

>100_bases
GTTACCGATGCCCCACAATACGTTTGCCGCTCATCACCCGCAGCGCCGCTCGCTCGCAGAGAGAGCAAATGGCGTAAATA
AAATCCATAAAATAGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRNRTLADLERVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDTRNCLNQLITEPSVASAM
FEYRFTGNGELAGHNLGNLMLKALDHLSIRPIEAINLVRSLLKVDALLIPMSEQPVDLMAIDHEGHPIYGEVNIDQLAQM
PQEMLLSPPVHATREAVEAINQADVILIGPGSFLTSLMPLLLLDELTQALRRSSASMIYIGNLGRELSPAAAALSLQDKL
TIMESKIGRKIIDAVIVSPTIDISGVKDRIIVQQPLEAKDIPHRHDRELLRQALENTLQQLNGADSV

Sequences:

>Translated_307_residues
MRNRTLADLERVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDTRNCLNQLITEPSVASAM
FEYRFTGNGELAGHNLGNLMLKALDHLSIRPIEAINLVRSLLKVDALLIPMSEQPVDLMAIDHEGHPIYGEVNIDQLAQM
PQEMLLSPPVHATREAVEAINQADVILIGPGSFLTSLMPLLLLDELTQALRRSSASMIYIGNLGRELSPAAAALSLQDKL
TIMESKIGRKIIDAVIVSPTIDISGVKDRIIVQQPLEAKDIPHRHDRELLRQALENTLQQLNGADSV
>Mature_307_residues
MRNRTLADLERVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDTRNCLNQLITEPSVASAM
FEYRFTGNGELAGHNLGNLMLKALDHLSIRPIEAINLVRSLLKVDALLIPMSEQPVDLMAIDHEGHPIYGEVNIDQLAQM
PQEMLLSPPVHATREAVEAINQADVILIGPGSFLTSLMPLLLLDELTQALRRSSASMIYIGNLGRELSPAAAALSLQDKL
TIMESKIGRKIIDAVIVSPTIDISGVKDRIIVQQPLEAKDIPHRHDRELLRQALENTLQQLNGADSV

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family

Homologues:

Organism=Escherichia coli, GI1786997, Length=301, Percent_Identity=77.7408637873754, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1158_YERPE (P58589)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AD0142
- RefSeq:   NP_670324.1
- RefSeq:   NP_992375.1
- RefSeq:   YP_002346197.1
- ProteinModelPortal:   P58589
- SMR:   P58589
- GeneID:   1147971
- GeneID:   1174007
- GeneID:   2764832
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1158
- KEGG:   ypk:y3024
- KEGG:   ypm:YP_1001
- HOGENOM:   HBG321904
- OMA:   FEYRFSG
- ProtClustDB:   CLSK870174
- BioCyc:   YPES187410:Y3024-MONOMER
- BioCyc:   YPES214092:YPO1158-MONOMER
- InterPro:   IPR002882
- InterPro:   IPR010119
- TIGRFAMs:   TIGR01826

Pfam domain/function: PF01933 UPF0052

EC number: NA

Molecular weight: Translated: 33219; Mature: 33219

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRTLADLERVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCEEE
GDTRNCLNQLITEPSVASAMFEYRFTGNGELAGHNLGNLMLKALDHLSIRPIEAINLVRS
CCHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LLKVDALLIPMSEQPVDLMAIDHEGHPIYGEVNIDQLAQMPQEMLLSPPVHATREAVEAI
HHHHHHHEECCCCCCCEEEEEECCCCEEEEECCHHHHHHCCHHHHCCCCCHHHHHHHHHH
NQADVILIGPGSFLTSLMPLLLLDELTQALRRSSASMIYIGNLGRELSPAAAALSLQDKL
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
TIMESKIGRKIIDAVIVSPTIDISGVKDRIIVQQPLEAKDIPHRHDRELLRQALENTLQQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LNGADSV
CCCCCCC
>Mature Secondary Structure
MRNRTLADLERVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCEEE
GDTRNCLNQLITEPSVASAMFEYRFTGNGELAGHNLGNLMLKALDHLSIRPIEAINLVRS
CCHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LLKVDALLIPMSEQPVDLMAIDHEGHPIYGEVNIDQLAQMPQEMLLSPPVHATREAVEAI
HHHHHHHEECCCCCCCEEEEEECCCCEEEEECCHHHHHHCCHHHHCCCCCHHHHHHHHHH
NQADVILIGPGSFLTSLMPLLLLDELTQALRRSSASMIYIGNLGRELSPAAAALSLQDKL
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
TIMESKIGRKIIDAVIVSPTIDISGVKDRIIVQQPLEAKDIPHRHDRELLRQALENTLQQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LNGADSV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430