Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is gpmA [H]
Identifier: 218928300
GI number: 218928300
Start: 1280296
End: 1281048
Strand: Reverse
Name: gpmA [H]
Synonym: YPO1133
Alternate gene names: 218928300
Gene position: 1281048-1280296 (Counterclockwise)
Preceding gene: 218928301
Following gene: 218928299
Centisome position: 27.53
GC content: 47.14
Gene sequence:
>753_bases ATGGCAGTAACTAAGCTAGTTTTGGTACGACACGGCGAAAGTCAATGGAACAACGAAAACCGCTTCACCGGTTGGTATGA TGTTGATCTGTCTGAAAAAGGCCGTTCTGAAGCAAAGGCAGCGGGTAAGCTGTTAAAAGATGAAGGCTTCACTTTTGATT TCGCCTACACCTCAGTATTAAAACGCGCTATCCACACCTTGTGGAACATTTTGGATGAATTAGATCAGGCATGGCTGCCA ACAGAAAAAACCTGGAAGCTTAACGAGCGTCACTACGGCGCACTGCAAGGCCTGAATAAATCTGAAACGGCTGAAAAATA CGGCGATGAGCAGGTTAAGCAATGGCGTCGTGGCTTTGCCATCACCCCTCCAGCACTGGAGAAAAGCGATGAGCGTTTCC CAGGCCATGACCCACGTTATGCAAAATTGACTGATGCTGAGCTGCCAACCACAGAAAGCTTGGCGCTGACTATTGAACGC GTGATTCCCTACTGGAATGACGTTATCAAACCACGTATTGCCAGCGGTGAACGCGTAATTATTGCTGCTCACGGTAACTC TTTACGTGCATTGGTAAAATATCTGGATGATCTGGGCGAAGACGAAATTCTTGAGCTGAACATCCCAACTGGCGTGCCAT TAGTGTATGAGTTTGATGAGAACTTCAAGCCTATCAAACACTACTATCTGGGTAACGCTGATGAAATCGCCGCTAAAGCT GCAGCGGTTGCTAACCAGGGTAAAGCGAAGTAA
Upstream 100 bases:
>100_bases GAGCTTACTGGAGTAAGTGATTCGGCTGATTGAGCGCAGCCAACGCACATGCAGCTTGAAGTATGACGGGCATATACCAA ACTTAATTGGAGTCAACGTT
Downstream 100 bases:
>100_bases TTAGCCCTGATTAACACAGTAAAAAAACCCCGTACATGAATAATGTCGGGGTTTTTTATTGACGGCTATGTGAATGCAGT CAGCACTCCGTTACCAAAGC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAVTKLVLVRHGESQWNNENRFTGWYDVDLSEKGRSEAKAAGKLLKDEGFTFDFAYTSVLKRAIHTLWNILDELDQAWLP TEKTWKLNERHYGALQGLNKSETAEKYGDEQVKQWRRGFAITPPALEKSDERFPGHDPRYAKLTDAELPTTESLALTIER VIPYWNDVIKPRIASGERVIIAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKA AAVANQGKAK
Sequences:
>Translated_250_residues MAVTKLVLVRHGESQWNNENRFTGWYDVDLSEKGRSEAKAAGKLLKDEGFTFDFAYTSVLKRAIHTLWNILDELDQAWLP TEKTWKLNERHYGALQGLNKSETAEKYGDEQVKQWRRGFAITPPALEKSDERFPGHDPRYAKLTDAELPTTESLALTIER VIPYWNDVIKPRIASGERVIIAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKA AAVANQGKAK >Mature_249_residues AVTKLVLVRHGESQWNNENRFTGWYDVDLSEKGRSEAKAAGKLLKDEGFTFDFAYTSVLKRAIHTLWNILDELDQAWLPT EKTWKLNERHYGALQGLNKSETAEKYGDEQVKQWRRGFAITPPALEKSDERFPGHDPRYAKLTDAELPTTESLALTIERV IPYWNDVIKPRIASGERVIIAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKAA AVANQGKAK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=256, Percent_Identity=56.25, Blast_Score=295, Evalue=3e-80, Organism=Homo sapiens, GI4505753, Length=253, Percent_Identity=56.5217391304348, Blast_Score=291, Evalue=5e-79, Organism=Homo sapiens, GI71274132, Length=253, Percent_Identity=54.1501976284585, Blast_Score=278, Evalue=4e-75, Organism=Homo sapiens, GI4502445, Length=256, Percent_Identity=46.484375, Blast_Score=251, Evalue=3e-67, Organism=Homo sapiens, GI40353764, Length=256, Percent_Identity=46.484375, Blast_Score=251, Evalue=3e-67, Organism=Homo sapiens, GI310129614, Length=165, Percent_Identity=56.969696969697, Blast_Score=190, Evalue=8e-49, Organism=Escherichia coli, GI1786970, Length=250, Percent_Identity=88, Blast_Score=448, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=52.4390243902439, Blast_Score=246, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6324516, Length=302, Percent_Identity=31.4569536423841, Blast_Score=143, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320183, Length=303, Percent_Identity=29.3729372937294, Blast_Score=127, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324857, Length=129, Percent_Identity=31.7829457364341, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=56.4, Blast_Score=275, Evalue=2e-74, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=56.4, Blast_Score=275, Evalue=2e-74, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=56.4, Blast_Score=275, Evalue=2e-74, Organism=Drosophila melanogaster, GI24646216, Length=250, Percent_Identity=53.6, Blast_Score=275, Evalue=2e-74, Organism=Drosophila melanogaster, GI28571817, Length=248, Percent_Identity=39.1129032258064, Blast_Score=181, Evalue=4e-46, Organism=Drosophila melanogaster, GI28571815, Length=248, Percent_Identity=39.1129032258064, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI24648979, Length=248, Percent_Identity=39.1129032258064, Blast_Score=180, Evalue=6e-46,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28358; Mature: 28227
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTKLVLVRHGESQWNNENRFTGWYDVDLSEKGRSEAKAAGKLLKDEGFTFDFAYTSVL CCHHEEEEEECCCHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH KRAIHTLWNILDELDQAWLPTEKTWKLNERHYGALQGLNKSETAEKYGDEQVKQWRRGFA HHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHCCCCCHHHHHHCCHHHHHHHHCCCC ITPPALEKSDERFPGHDPRYAKLTDAELPTTESLALTIERVIPYWNDVIKPRIASGERVI CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKA EEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHH AAVANQGKAK HHHHCCCCCC >Mature Secondary Structure AVTKLVLVRHGESQWNNENRFTGWYDVDLSEKGRSEAKAAGKLLKDEGFTFDFAYTSVL CHHEEEEEECCCHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH KRAIHTLWNILDELDQAWLPTEKTWKLNERHYGALQGLNKSETAEKYGDEQVKQWRRGFA HHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHCCCCCHHHHHHCCHHHHHHHHCCCC ITPPALEKSDERFPGHDPRYAKLTDAELPTTESLALTIERVIPYWNDVIKPRIASGERVI CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKA EEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHH AAVANQGKAK HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA