Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928265
Identifier: 218928265
GI number: 218928265
Start: 1240596
End: 1242266
Strand: Reverse
Name: 218928265
Synonym: YPO1096
Alternate gene names: NA
Gene position: 1242266-1240596 (Counterclockwise)
Preceding gene: 218928266
Following gene: 218928263
Centisome position: 26.69
GC content: 32.73
Gene sequence:
>1671_bases ATGAAAAAATTAATACTAAAGAAGATCATGATACTCTCAGATTCAGGAAAATCCGCGAGGCAATTCGAGTTCGGAGAGCA TCTAACACTGATAACAGCAGATGATGATAATAGCGTAGGGAAATCTACGCTTGCAAAAATGATTTTTTGGACTTTTGGCT GTGAGCCCATTTTTTCCGAGGTTTGGAGAACATTAGACTGTACATCAATTATAGAGTTTGAGATAAATAATGCACCTTAC ATTATTCATAGATATAAAAATGAAATTAAAATTAGGCATAGCAATGGTAAACTACACAGTTTCCCAAAAATAACCGGTGA TTATTCAAAGTATTTTTCAGAACTTGTTAATTTTAATGTATTACTCCCTAAGAAAGGTCAATTAACACTAGAAACCCCTC CACCTGCATATTACTTCATACCCTTTTATATTGACCAAAAAAGAACATGGGCTAAACCTTGGGATAGTTTCGAGAATCTT CAGCAATATAGTAGCTGGGCAAAACCAGTCATCTCCTACCACTCAGGATTATTTATAAAAGCACACTTTGAAGTTGAAAA AGATATTTATGTAATAAAAAGAGAGTTAGAAGAAGTTGAGAAAGGCGTTACTGAACTGAATAATGCAGTTATAATACTCA GGCAAAACCTTATCGATACAGACAATGTACTTCCTTCGACCGAGTTTATTTTTAGTGTTATACAAGAATCAGAAAAAAAC AAAAAAAACCTTCTTGAAGAAAGAACTAACTTAAGAGTTGAAAAAATACGACTTGAGTCGCAAATCAAATTAGCCAAAGG GATTATTAGTGAGCTAGATAAAGATTATATTTTTTCCGTCGAAAACATGGAAGATGGTGACATAGAGTGCCCAACATGTG GAACAATACATGAAAATTCTATAGCACATCGCACTAGCATTTTGATTGATATGGAACTTGCAAAAAACCAACTCGAATCC TTAGAGTCAGAAGTCAACGGAATAATAAATTTGCTAGTTATAAAAGATGAGGAGATTACAGAGCAAAGCAATAAGAGCGA ACGAAGTTATAATAATGTCATTGAAAGTGACTCCAATTCGTTAATATCATTCACCAATGATAAGTTTGAAAAACGCGCAC ACGAAATAAATAGTAAAAAAAATATAACCATTGAAATTAAAAAATCAGAAGAAAAAACAGCAAAAAAATCTCAAAGTGAC ATACTATCCAAGGAACAAAAAAGTGAAATAAAGCAAAGCTTCGCAGATAGATTATCGAAATACATAACAAAATTAAAAGT TAACGTTGACATATCTAAAATAAAAAGCCCTCTTGATTATAAAAAAATATATGAAGTAGGCGGTGCAGCAGAAGATGCAA GGGCTGTCCTTGGTTATTATTTAGCAATTTATGAACAAGTAGCGGACTCATGTGAAGAAGCATTGCCACCTTTGGTTATT GATACCCCAAACCAACAAGAACAAGCAAGCGGGAATTATACCAACATTATAAAATCAATTTCTGACGGCATAAATAATGA TAGGCAATATGTTATATGTGCCATGGAACACAAAGCCTTAGAGCAAATAAAAACAAATGCTCAAGTAATTAAATTAGACG CAAGAAAAATACTATTACAAGATCAATACGAGAAAATTTCAAAACTGCGAAATGAAGTTATTTTCGATTGA
Upstream 100 bases:
>100_bases TTTCTATATCATCTGCGATCATTTACGAAATGGTAGAGGCAACAAACTAAAATGGAAAAAAACTACAAGCTATTGGTTCG AAGCTTAAGGATGAAGGTTT
Downstream 100 bases:
>100_bases AATCCTTCTTCGTATCAATAGGTGTAAGGTCGTCTGCGCACAATGGTCCCCCACCTACGCGCTCTGACTTTATCATGCAC TTTTCATGCATGACATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSEVWRTLDCTSIIEFEINNAPY IIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNVLLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENL QQYSSWAKPVISYHSGLFIKAHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENSIAHRTSILIDMELAKNQLES LESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNSLISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSD ILSKEQKSEIKQSFADRLSKYITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI DTPNQQEQASGNYTNIIKSISDGINNDRQYVICAMEHKALEQIKTNAQVIKLDARKILLQDQYEKISKLRNEVIFD
Sequences:
>Translated_556_residues MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSEVWRTLDCTSIIEFEINNAPY IIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNVLLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENL QQYSSWAKPVISYHSGLFIKAHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENSIAHRTSILIDMELAKNQLES LESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNSLISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSD ILSKEQKSEIKQSFADRLSKYITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI DTPNQQEQASGNYTNIIKSISDGINNDRQYVICAMEHKALEQIKTNAQVIKLDARKILLQDQYEKISKLRNEVIFD >Mature_556_residues MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSEVWRTLDCTSIIEFEINNAPY IIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNVLLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENL QQYSSWAKPVISYHSGLFIKAHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENSIAHRTSILIDMELAKNQLES LESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNSLISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSD ILSKEQKSEIKQSFADRLSKYITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI DTPNQQEQASGNYTNIIKSISDGINNDRQYVICAMEHKALEQIKTNAQVIKLDARKILLQDQYEKISKLRNEVIFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63963; Mature: 63963
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSE CHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH VWRTLDCTSIIEFEINNAPYIIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNV HHHHCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCEECCCCCCCHHHHHHHHHHCCEE LLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENLQQYSSWAKPVISYHSGLFIK EECCCCCEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE AHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN EEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCH KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENS HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC IAHRTSILIDMELAKNQLESLESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNS HHHHHEEEEEHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHCCCHHHHHHHHHCCCCCC LISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSDILSKEQKSEIKQSFADRLSK EEEECCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI HHHHHEEEEEHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE DTPNQQEQASGNYTNIIKSISDGINNDRQYVICAMEHKALEQIKTNAQVIKLDARKILLQ ECCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEHHHHHHHH DQYEKISKLRNEVIFD HHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSE CHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH VWRTLDCTSIIEFEINNAPYIIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNV HHHHCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCEECCCCCCCHHHHHHHHHHCCEE LLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENLQQYSSWAKPVISYHSGLFIK EECCCCCEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE AHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN EEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCH KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENS HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC IAHRTSILIDMELAKNQLESLESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNS HHHHHEEEEEHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHCCCHHHHHHHHHCCCCCC LISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSDILSKEQKSEIKQSFADRLSK EEEECCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI HHHHHEEEEEHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE DTPNQQEQASGNYTNIIKSISDGINNDRQYVICAMEHKALEQIKTNAQVIKLDARKILLQ ECCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEHHHHHHHH DQYEKISKLRNEVIFD HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA