Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928263
Identifier: 218928263
GI number: 218928263
Start: 1239803
End: 1239976
Strand: Reverse
Name: 218928263
Synonym: YPO1094
Alternate gene names: NA
Gene position: 1239976-1239803 (Counterclockwise)
Preceding gene: 218928265
Following gene: 218928262
Centisome position: 26.64
GC content: 48.28
Gene sequence:
>174_bases TTGCCCATCGGGGATACTGTCATTGGTTATCAACTAAGCGAACGACTCGCCTCAGTAGAGCAACGGCCTCTTAAACCGGT GGTCTACCATGACGGCGCTGTTTTTGCACACTTAAATCAAGATGCATCACTGCATCAAAAGACTCCTTATACCTCAATCT CTGGCGCGTGCTAA
Upstream 100 bases:
>100_bases TTGAACCTTTGAAAACGGGTGTCACCCCACTAAGGTGATAAAGGTACTCTTATCACACTAACGAAATGGCTAATTACCAG CATTTCCTGACCAACCGGTA
Downstream 100 bases:
>100_bases ACGCCGCTGGCTGCGCTCTGCTATGCCGAAAGGCATCTGCTAGCGCCTGCCCTGTTGCGTGTTGCTCGTGGCGTCACTTT TACGAGTGAAAGTGACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MPIGDTVIGYQLSERLASVEQRPLKPVVYHDGAVFAHLNQDASLHQKTPYTSISGAC
Sequences:
>Translated_57_residues MPIGDTVIGYQLSERLASVEQRPLKPVVYHDGAVFAHLNQDASLHQKTPYTSISGAC >Mature_56_residues PIGDTVIGYQLSERLASVEQRPLKPVVYHDGAVFAHLNQDASLHQKTPYTSISGAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6211; Mature: 6080
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIGDTVIGYQLSERLASVEQRPLKPVVYHDGAVFAHLNQDASLHQKTPYTSISGAC CCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIGDTVIGYQLSERLASVEQRPLKPVVYHDGAVFAHLNQDASLHQKTPYTSISGAC CCCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA