The gene/protein map for NC_003143 is currently unavailable.
Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218928260

Identifier: 218928260

GI number: 218928260

Start: 1237777

End: 1238319

Strand: Reverse

Name: 218928260

Synonym: YPO1091

Alternate gene names: NA

Gene position: 1238319-1237777 (Counterclockwise)

Preceding gene: 218928261

Following gene: 218928259

Centisome position: 26.61

GC content: 50.64

Gene sequence:

>543_bases
ATGATTTTTTATTTTTTTCTGGCGGGCGCTTTGCAGTATAATCCTTTCGCTGCGGCAAAATCCGTAGCCGGAATTAGCGT
TCCGAAAATCTTCTTGATACCTAGCCTCGTCATTCAGACATGGTCTTTTATAGGTATGGCTTGCGCACACCCGTCAATGG
TGGCCCAGGCGGGGGCTCCGAAAGGAGCGCCGGTTTCCAAGAAGTCCGGTAACGCTAACTCCGTCTGGGCTACCACCCAA
GGGATTAGCGTCTCAGGTGGTAGTCATTACAACTACTTCTTGGAGGCGGCCCAATGGCTACTACCCTTCACTGTCTGTAC
CCGCAATACGTTCGTACCCATCCGGGGGTGTGCTATGCATAACTCTTCCCCGCTCACGATTGAAGAAATTGTTGATCACT
GCCACGCACTGGTATTGGCAATGCTCGAAATTACCGATCCTACAGCGAAAGAACTGTTGCTATTTATTCTGGCTGAACGG
CTGGATTTGCTGCAACTGATGCTGGATGAAGTGCCGGATGCAGAGGAGGCTAACCATGAGTAG

Upstream 100 bases:

>100_bases
GCCCAATAAAATTAGGGCCGCGTTCAGTGGCCTGGGTTGAAAGTGAAGTCGATGAATGGGTCATTATCAGAATCAATCAA
CGCGAGGAGGGTCGCAACTA

Downstream 100 bases:

>100_bases
GTTTGTTTCCGACATCATTCGCGCATCACAACACCACTGGAGCAATATCCTTTCCTCCTTAGCTATTCCTATTCCCCACC
TTAACAAACATGGCCCCTGC

Product: putative prophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAPKGAPVSKKSGNANSVWATTQ
GISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMHNSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAER
LDLLQLMLDEVPDAEEANHE

Sequences:

>Translated_180_residues
MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAPKGAPVSKKSGNANSVWATTQ
GISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMHNSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAER
LDLLQLMLDEVPDAEEANHE
>Mature_180_residues
MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAPKGAPVSKKSGNANSVWATTQ
GISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMHNSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAER
LDLLQLMLDEVPDAEEANHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19522; Mature: 19522

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAP
CEEEEEEHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
KGAPVSKKSGNANSVWATTQGISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMH
CCCCCCCCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
NSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAERLDLLQLMLDEVPDAEEANHE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAP
CEEEEEEHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
KGAPVSKKSGNANSVWATTQGISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMH
CCCCCCCCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
NSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAERLDLLQLMLDEVPDAEEANHE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA