Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928260
Identifier: 218928260
GI number: 218928260
Start: 1237777
End: 1238319
Strand: Reverse
Name: 218928260
Synonym: YPO1091
Alternate gene names: NA
Gene position: 1238319-1237777 (Counterclockwise)
Preceding gene: 218928261
Following gene: 218928259
Centisome position: 26.61
GC content: 50.64
Gene sequence:
>543_bases ATGATTTTTTATTTTTTTCTGGCGGGCGCTTTGCAGTATAATCCTTTCGCTGCGGCAAAATCCGTAGCCGGAATTAGCGT TCCGAAAATCTTCTTGATACCTAGCCTCGTCATTCAGACATGGTCTTTTATAGGTATGGCTTGCGCACACCCGTCAATGG TGGCCCAGGCGGGGGCTCCGAAAGGAGCGCCGGTTTCCAAGAAGTCCGGTAACGCTAACTCCGTCTGGGCTACCACCCAA GGGATTAGCGTCTCAGGTGGTAGTCATTACAACTACTTCTTGGAGGCGGCCCAATGGCTACTACCCTTCACTGTCTGTAC CCGCAATACGTTCGTACCCATCCGGGGGTGTGCTATGCATAACTCTTCCCCGCTCACGATTGAAGAAATTGTTGATCACT GCCACGCACTGGTATTGGCAATGCTCGAAATTACCGATCCTACAGCGAAAGAACTGTTGCTATTTATTCTGGCTGAACGG CTGGATTTGCTGCAACTGATGCTGGATGAAGTGCCGGATGCAGAGGAGGCTAACCATGAGTAG
Upstream 100 bases:
>100_bases GCCCAATAAAATTAGGGCCGCGTTCAGTGGCCTGGGTTGAAAGTGAAGTCGATGAATGGGTCATTATCAGAATCAATCAA CGCGAGGAGGGTCGCAACTA
Downstream 100 bases:
>100_bases GTTTGTTTCCGACATCATTCGCGCATCACAACACCACTGGAGCAATATCCTTTCCTCCTTAGCTATTCCTATTCCCCACC TTAACAAACATGGCCCCTGC
Product: putative prophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAPKGAPVSKKSGNANSVWATTQ GISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMHNSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAER LDLLQLMLDEVPDAEEANHE
Sequences:
>Translated_180_residues MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAPKGAPVSKKSGNANSVWATTQ GISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMHNSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAER LDLLQLMLDEVPDAEEANHE >Mature_180_residues MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAPKGAPVSKKSGNANSVWATTQ GISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMHNSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAER LDLLQLMLDEVPDAEEANHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19522; Mature: 19522
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAP CEEEEEEHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC KGAPVSKKSGNANSVWATTQGISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMH CCCCCCCCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC NSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAERLDLLQLMLDEVPDAEEANHE CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIFYFFLAGALQYNPFAAAKSVAGISVPKIFLIPSLVIQTWSFIGMACAHPSMVAQAGAP CEEEEEEHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC KGAPVSKKSGNANSVWATTQGISVSGGSHYNYFLEAAQWLLPFTVCTRNTFVPIRGCAMH CCCCCCCCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC NSSPLTIEEIVDHCHALVLAMLEITDPTAKELLLFILAERLDLLQLMLDEVPDAEEANHE CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA