| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928158
Identifier: 218928158
GI number: 218928158
Start: 1093299
End: 1094675
Strand: Direct
Name: 218928158
Synonym: YPO0986
Alternate gene names: NA
Gene position: 1093299-1094675 (Clockwise)
Preceding gene: 218928156
Following gene: 218928159
Centisome position: 23.49
GC content: 49.24
Gene sequence:
>1377_bases ATGCTAACACGCCGGAAATTTTTGATGATGAGTGCCGGAGCAGGTCTTTTACTCTCTGTACCCATGTTGGCTCGAACCGG TGTTCAGCCTGCACAAGCTGCCACCGCCATTACGCAAGTTTTTGGTGACGGGATCCGGCTAACCGCTGTTGCGGTCGAAT ATCCGACAGAAGTCAGCGCTGAAGGGCTAAACCCCGCCGACTTTCATGTTGAAGGGCGAACAGTAACCGGTGTATGGACC AGCACTTCTACTAATCCGGCAGATATAGCGCCCTCAGGACGCTATATGATTATAGCGCTATCACCTGATGACAAGAATGC AACGCTGGCCGAACAGGTGCAGCCAAATAGTAAAAACAACAGCAACAAATCTGCCAATGGAAGAGGCGGCCCCGGTAATG CAGGCGATATTCCTGCCTATGATACGGTTTACCGGACAGCTCAAGCCACGGTACTGCGCCTTCCGTCAGTTCATACCGCC AGTGGTGATACGCTTCCCGCTAGCGAGAAAGCGTTGACAACCCAATATGTGGAAAACTTGATCGTTGATGATTTTCAGCA GCTTGAGTTTTATGATGAAAAAACAGGTAAAAAGCTGAAATACAACCTTTTCATCCCCAAAGACTATAGCCCTGATAAAG ACTATAGCCCTGATAAAAACTATAGCCCTGATAAGGCTTGGCCGCTGGTGTTATTCATGCATGATGCTGGCGCCACCAGC GATGTTACACGCACCACCCTGTATCAAGGCTTAGGCGCTATTGCTTGGGCAAGCCCAGAAGATCAGGCACAGCGCCCCTG CTTTGTTCTTGCACCTCAGTATGAAGAAATCATTGCCGATGATGACTCAAAAACATCTGACATGCTGGACACCACCATTG ATCTTATCAATGTACTTTCAGAGCAGTACAACATTGATAAGAGCCGTATCTATGCCACAGGGCAGTCGGGTGGATGCATG ATGACGATAGCGATGAACATCAAGTATCCGGATTTCTTCGCGGCCTCTTTTTTGGTTGCGGGTCAGTGGGATCCCGCGTT GGTGAAACCTCTTGCCCAGCAAAAACTCTGGATTCTGGTTTCTCAGGATGATAACAAAGCCTGGCCAGGTCAGAATGCCA TCATTGATGTTCTGGAAAAAGAGGGTGTCCAAATCAGCCGTGCAATATGGGACGGAACATGGAATGAAGAGCAATTTCGT CAGGCTTTTGAACAAATAGAGGCAGAAAAAAGCCCGATTAACTATGTGGCATTTCGTGAAGGCACCGTGATTCCTGAGGG GCAATCCACCGAAGGTGCCAGCGGGCATCGCAATACCTGGCGAATTGCCTATACCATCTCCCCCATACGCGAATGGATTT TCAGGCAACAGCGCTAG
Upstream 100 bases:
>100_bases AATATGAGTCATCCATTTGCCACGAATCGCATAAATTCTTACAGCCTTGTTAAAATGAAACTAAAGTAGATACAACGTGC TGAGTTAAAGGAGACAAATA
Downstream 100 bases:
>100_bases TTGATTAACGAGGGCTTACCCAACGCCGCACGCTTCTCTTTGATCGTTCGACAGCCCTCACCCTTCGACAAAACGACGAT TTATTGAGCATTAAAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Pyrroline-5-Carboxylate Reductase; Phospholipase/Carboxylesterase Family; Peptidase-Like Protein; Serine/Arginine Repetitive Matrix
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKDYSPDKNYSPDKAWPLVLFMHDAGATS DVTRTTLYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCM MTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFR QAFEQIEAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR
Sequences:
>Translated_458_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKDYSPDKNYSPDKAWPLVLFMHDAGATS DVTRTTLYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCM MTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFR QAFEQIEAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR >Mature_458_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKDYSPDKNYSPDKAWPLVLFMHDAGATS DVTRTTLYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCM MTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFR QAFEQIEAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR
Specific function: Unknown
COG id: COG4099
COG function: function code R; Predicted peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50543; Mature: 50543
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSA CCCCCEEEEEECCCCCEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC EGLNPADFHVEGRTVTGVWTSTSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNN CCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCC SNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTASGDTLPASEKALTTQYVENL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEECCCCCCCCCCHHHHHHHHHHHH IVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKDYSPDKNYSPDKAWPLVLFMHDAGATS HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC DVTRTTLYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLS HHHHHHHHHCCCCEEECCCHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHH EQYNIDKSRIYATGQSGGCMMTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILV HHHCCCCCEEEEECCCCCEEEEEEEECCCCCHHHHHEEEECCCCHHHHHHHCCCEEEEEE SQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQIEAEKSPINYVAFRE ECCCCCCCCCCCHHHHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC GTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR CEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSA CCCCCEEEEEECCCCCEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC EGLNPADFHVEGRTVTGVWTSTSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNN CCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCC SNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTASGDTLPASEKALTTQYVENL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEECCCCCCCCCCHHHHHHHHHHHH IVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKDYSPDKNYSPDKAWPLVLFMHDAGATS HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC DVTRTTLYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLS HHHHHHHHHCCCCEEECCCHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHH EQYNIDKSRIYATGQSGGCMMTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILV HHHCCCCCEEEEECCCCCEEEEEEEECCCCCHHHHHEEEECCCCHHHHHHHCCCEEEEEE SQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQIEAEKSPINYVAFRE ECCCCCCCCCCCHHHHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC GTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR CEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA