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The map label for this gene is yggU [C]

Identifier: 218928116

GI number: 218928116

Start: 1035183

End: 1035473

Strand: Direct

Name: yggU [C]

Synonym: YPO0944

Alternate gene names: 218928116

Gene position: 1035183-1035473 (Clockwise)

Preceding gene: 218928115

Following gene: 218928117

Centisome position: 22.24

GC content: 50.52

Gene sequence:

>291_bases
GTGAGTGCAGTCCTCTCCACCGAAAACGGGCTGATACTCAAGCTCTATATTCAGCCCAAAGCCAGTCGAGATCAGATAGT
CGGTTTACATGGCGACGAACTTAAAGTCGCCATTACCGCCCCGCCTGTTGATGGTCAGGCTAATACCCATTTGGTTAAGT
TTATCGCCAAGCAGTTTCGGGTAGCCAAGAGCCAGGTGATTATCGAAAAGGGCGAACTGGGGCGGCATAAGCAGATAAAA
GTGATTAACCCGCAGCAGATTCCGCCAGAAGTCACCATACTGCTCGAGTGA

Upstream 100 bases:

>100_bases
CGATGGGGGGTATCGATTTCTCAGCAATGGTTGTCATCCTTATCTTGTATCTGCTCAACTTTTTAGGCATGGATCTATTT
GGAGCGATGTGGGTCATGCT

Downstream 100 bases:

>100_bases
GTTGATATTCCTCCGCAAGAATTGGGTTATTGGTTGTCAGCCCAACAGACTGCGCTCAATACCGATAGCCGTCAGCCTAT
AAAAATTCAGGATTCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSAVLSTENGLILKLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANTHLVKFIAKQFRVAKSQVIIEKGELGRHKQIK
VINPQQIPPEVTILLE

Sequences:

>Translated_96_residues
MSAVLSTENGLILKLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANTHLVKFIAKQFRVAKSQVIIEKGELGRHKQIK
VINPQQIPPEVTILLE
>Mature_95_residues
SAVLSTENGLILKLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANTHLVKFIAKQFRVAKSQVIIEKGELGRHKQIKV
INPQQIPPEVTILLE

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=96, Percent_Identity=79.1666666666667, Blast_Score=164, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3141_YERPN (Q1CEW2)

Other databases:

- EMBL:   CP000305
- EMBL:   ACNQ01000017
- RefSeq:   YP_649068.1
- ProteinModelPortal:   Q1CEW2
- SMR:   Q1CEW2
- STRING:   Q1CEW2
- GeneID:   4125107
- GenomeReviews:   CP000305_GR
- KEGG:   ypn:YPN_3141
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- ProtClustDB:   PRK05090
- BioCyc:   YPES377628:YPN_3141-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10572; Mature: 10440

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVLSTENGLILKLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANTHLVKFIAKQFR
CCCEEECCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
VAKSQVIIEKGELGRHKQIKVINPQQIPPEVTILLE
HCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
SAVLSTENGLILKLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANTHLVKFIAKQFR
CCEEECCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
VAKSQVIIEKGELGRHKQIKVINPQQIPPEVTILLE
HCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA