Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is creD [H]
Identifier: 218928067
GI number: 218928067
Start: 978649
End: 980127
Strand: Reverse
Name: creD [H]
Synonym: YPO0894
Alternate gene names: 218928067
Gene position: 980127-978649 (Counterclockwise)
Preceding gene: 218928068
Following gene: 218928065
Centisome position: 21.06
GC content: 45.77
Gene sequence:
>1479_bases ATGTTAAAAGGAGTGCAAGTCATGTTCAAATCTGTGTTGTTTTGGAAAATAGTTACGCTGCTGGGATTAATGCTATTGAT GATGATCCCCAAAGGGATGCTGCTGCATGTAATCGATGAACGCAGTGGCTACCGACAAAGTGTGATCGATAAAGTCAGTG ACAGTACCAGCCGTTCACAAAAAATCCTCGGTCCATTGATTGTCGTGCCGTATAGAGAGTGGGTTGAAACTGAAGTCGAT GGCAAGAAGCAAGGGAAATGGACCCACTTTTATCACTACATACTGCCAAACGTGATGACTGTAAAAGGGACCCCAGATGT TGAAGTTCGCCAGTTAGGTATTTATAAAACACAGGTATATCAGGGTGAATTCGATTTCCATGGGGAATTTGAGGTATCTT CGCTGGATGATTTAGATCGTGAAGGCGTCATCATTGGTAAGCCTTCACTGGTGCTGGCACTGAGTGATGCGCGGGGTATC CAGCGCATTTCGCCACTCAGCGTAGGGAAGACTAAAATTAACTTCGAACCCGGCGCTTTCTCCGGTCACTCGGTACAAGG TGTTCATGCACCATTGACAATAGAGCAGGTTCTACAGGGTAAATTTGATGTCGATTTCACCATGTCGCTTGCGGGTACGA CTAGCTTATCGGTAGTCCCGGTTGGGCGTAACAGTGAATTAACGTTACAAAGTAACTGGCCACATCCTAATTTTGTCGGT AATTTTTTACCTTTGCAGCGCAAGGTTGATGAGAAAGGCTTCCGTGCTCACTGGAGCAGTAATTGGTTGGCCAACAGCAT GAACACGAATTTCACCGGTGGCGATGCAGCCTTTCATTTTGGTAGCTTACCGGCCTTCACCACCAGCCTGATTGAACCGG TTGATCACTACCAATTAACCGAAAGAGCCATTAAATATGCTATTTTATTTATCGGTCTGACATTCTTCAGCTTCTTCCTA TTCGAGAGTCTGACGTCATTGCGCCTGCACCCAATGCAATATCTGTTAGTCGGGGCGGCATTGGTTCTATTCTATCTGAT GTTGTTAGCGTTCTCTGAACACATTGGTTTCACACTGGCTTACCTTCTGGCCAGTCTGAGCTGTAGCTTATTGATTGCTA TCTATTTGAGTGCCGTATTGGGCGGATGGTTGCGCGGCACATTGTTTGCCTGCGGCTTATTATTGTTGTACGGCATTTTG TTCGGATTGTTACAATCAGAGGACAACGCACTGCTGTTAGGGGCTGGGTTACTGTTTGTTGTCTTGACGGTGGTAATGTT ATTGACGCGGCGTTTAGACTGGTACCAAGTTGCTGATACACAACGGTTGACCGAGTGGAGAGCTCCAGAGCCAAGCGCTG AAGAGAGCCCGAGCAAAACGGCACCAGAGGGCGAGAGTATGAAAGATGATAATAAAAAAAAAGATGATCACGTAAAAAAA GACGCTAATGAGAAAGATGAGTTCCGTTTATGGAAGTAA
Upstream 100 bases:
>100_bases GAGGGTTTATCGCCAACTTCACGTTCACTTCACATAGCCTCATTCACCTTTCACTTCATGGTCGTAAACTGCTCTCCTGA TGTTAAAAGGAGTGCAATTC
Downstream 100 bases:
>100_bases CCGGGCGCAGCTAGACTAGACTAAACTTAACGGGCATATCGGGTGCCCGTTAAATTGAGCTCTGATGTAACAGGTTCTGA CCCGGAGGATCAAAGTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MLKGVQVMFKSVLFWKIVTLLGLMLLMMIPKGMLLHVIDERSGYRQSVIDKVSDSTSRSQKILGPLIVVPYREWVETEVD GKKQGKWTHFYHYILPNVMTVKGTPDVEVRQLGIYKTQVYQGEFDFHGEFEVSSLDDLDREGVIIGKPSLVLALSDARGI QRISPLSVGKTKINFEPGAFSGHSVQGVHAPLTIEQVLQGKFDVDFTMSLAGTTSLSVVPVGRNSELTLQSNWPHPNFVG NFLPLQRKVDEKGFRAHWSSNWLANSMNTNFTGGDAAFHFGSLPAFTTSLIEPVDHYQLTERAIKYAILFIGLTFFSFFL FESLTSLRLHPMQYLLVGAALVLFYLMLLAFSEHIGFTLAYLLASLSCSLLIAIYLSAVLGGWLRGTLFACGLLLLYGIL FGLLQSEDNALLLGAGLLFVVLTVVMLLTRRLDWYQVADTQRLTEWRAPEPSAEESPSKTAPEGESMKDDNKKKDDHVKK DANEKDEFRLWK
Sequences:
>Translated_492_residues MLKGVQVMFKSVLFWKIVTLLGLMLLMMIPKGMLLHVIDERSGYRQSVIDKVSDSTSRSQKILGPLIVVPYREWVETEVD GKKQGKWTHFYHYILPNVMTVKGTPDVEVRQLGIYKTQVYQGEFDFHGEFEVSSLDDLDREGVIIGKPSLVLALSDARGI QRISPLSVGKTKINFEPGAFSGHSVQGVHAPLTIEQVLQGKFDVDFTMSLAGTTSLSVVPVGRNSELTLQSNWPHPNFVG NFLPLQRKVDEKGFRAHWSSNWLANSMNTNFTGGDAAFHFGSLPAFTTSLIEPVDHYQLTERAIKYAILFIGLTFFSFFL FESLTSLRLHPMQYLLVGAALVLFYLMLLAFSEHIGFTLAYLLASLSCSLLIAIYLSAVLGGWLRGTLFACGLLLLYGIL FGLLQSEDNALLLGAGLLFVVLTVVMLLTRRLDWYQVADTQRLTEWRAPEPSAEESPSKTAPEGESMKDDNKKKDDHVKK DANEKDEFRLWK >Mature_492_residues MLKGVQVMFKSVLFWKIVTLLGLMLLMMIPKGMLLHVIDERSGYRQSVIDKVSDSTSRSQKILGPLIVVPYREWVETEVD GKKQGKWTHFYHYILPNVMTVKGTPDVEVRQLGIYKTQVYQGEFDFHGEFEVSSLDDLDREGVIIGKPSLVLALSDARGI QRISPLSVGKTKINFEPGAFSGHSVQGVHAPLTIEQVLQGKFDVDFTMSLAGTTSLSVVPVGRNSELTLQSNWPHPNFVG NFLPLQRKVDEKGFRAHWSSNWLANSMNTNFTGGDAAFHFGSLPAFTTSLIEPVDHYQLTERAIKYAILFIGLTFFSFFL FESLTSLRLHPMQYLLVGAALVLFYLMLLAFSEHIGFTLAYLLASLSCSLLIAIYLSAVLGGWLRGTLFACGLLLLYGIL FGLLQSEDNALLLGAGLLFVVLTVVMLLTRRLDWYQVADTQRLTEWRAPEPSAEESPSKTAPEGESMKDDNKKKDDHVKK DANEKDEFRLWK
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=428, Percent_Identity=46.9626168224299, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 55184; Mature: 55184
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGVQVMFKSVLFWKIVTLLGLMLLMMIPKGMLLHVIDERSGYRQSVIDKVSDSTSRSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHH KILGPLIVVPYREWVETEVDGKKQGKWTHFYHYILPNVMTVKGTPDVEVRQLGIYKTQVY HHHCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHCCCEEEEEE QGEFDFHGEFEVSSLDDLDREGVIIGKPSLVLALSDARGIQRISPLSVGKTKINFEPGAF ECCCCCCCCEECCCCCCCCCCCEEEECCCEEEEECCCCCCHHCCCCCCCCEEEEECCCCC SGHSVQGVHAPLTIEQVLQGKFDVDFTMSLAGTTSLSVVPVGRNSELTLQSNWPHPNFVG CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCC NFLPLQRKVDEKGFRAHWSSNWLANSMNTNFTGGDAAFHFGSLPAFTTSLIEPVDHYQLT CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHH ERAIKYAILFIGLTFFSFFLFESLTSLRLHPMQYLLVGAALVLFYLMLLAFSEHIGFTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLASLSCSLLIAIYLSAVLGGWLRGTLFACGLLLLYGILFGLLQSEDNALLLGAGLLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH VLTVVMLLTRRLDWYQVADTQRLTEWRAPEPSAEESPSKTAPEGESMKDDNKKKDDHVKK HHHHHHHHHCCCCHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC DANEKDEFRLWK CCCCCCCCCCCC >Mature Secondary Structure MLKGVQVMFKSVLFWKIVTLLGLMLLMMIPKGMLLHVIDERSGYRQSVIDKVSDSTSRSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHH KILGPLIVVPYREWVETEVDGKKQGKWTHFYHYILPNVMTVKGTPDVEVRQLGIYKTQVY HHHCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHCCCEEEEEE QGEFDFHGEFEVSSLDDLDREGVIIGKPSLVLALSDARGIQRISPLSVGKTKINFEPGAF ECCCCCCCCEECCCCCCCCCCCEEEECCCEEEEECCCCCCHHCCCCCCCCEEEEECCCCC SGHSVQGVHAPLTIEQVLQGKFDVDFTMSLAGTTSLSVVPVGRNSELTLQSNWPHPNFVG CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCC NFLPLQRKVDEKGFRAHWSSNWLANSMNTNFTGGDAAFHFGSLPAFTTSLIEPVDHYQLT CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHH ERAIKYAILFIGLTFFSFFLFESLTSLRLHPMQYLLVGAALVLFYLMLLAFSEHIGFTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLASLSCSLLIAIYLSAVLGGWLRGTLFACGLLLLYGILFGLLQSEDNALLLGAGLLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH VLTVVMLLTRRLDWYQVADTQRLTEWRAPEPSAEESPSKTAPEGESMKDDNKKKDDHVKK HHHHHHHHHCCCCHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC DANEKDEFRLWK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]