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The map label for this gene is prfB

Identifier: 218928062

GI number: 218928062

Start: 973271

End: 974293

Strand: Direct

Name: prfB

Synonym: YPO0889

Alternate gene names: NA

Gene position: 973271-974293 (Clockwise)

Preceding gene: 218928055

Following gene: 218928066

Centisome position: 20.91

GC content: 47.51

Gene sequence:

>1099_bases
ATGTTTGAAATAAACCCGGTAAAAAACCGAATTCAGGACCTGTCTGATCGGACAGCCGTTCTCAGGGGGTATCTTTGACT
ATGATGCCAAGAAAGAGCGACTGGAAGAAGTAAACGCCGAGCTGGAACAGCCCGACGTCTGGAATGAACCCGAACGCGCT
CAAGCGTTGGGCAAAGAGCGTTCTACGCTGGAAGAGATTGTCACCACCATTGATCAATTAGAGCAAGGCTTGGAAGACGT
GTCCGGCCTGCTGGAATTAGCCGTTGAAGCTGATGATGAAGAAACCTTTAACGAAACAATTGCTGAGTTAGAGGTTCTTG
ATGGCAAGCTGGGCCAGCTCGAATTCCGTCGTATGTTCTCTGGCGAATATGATCGCGCCAACTGCTATCTGGACTTACAA
GCAGGCTCTGGTGGCACTGAAGCTCAGGACTGGGCCAGTATGTTACTGCGTATGTACTTGCGCTGGGCTGAGTCTAGAGG
CTTTAAAACTGAGATCATCGAAGAATCTGACGGTGATGTTGCTGGTTTGAAATCTGCCACCGTCAAAATAATTGGTGAAT
ATGCCTTCGGTTGGTTACGTACTGAAACTGGCGTACACCGTCTGGTACGTAAAAGCCCATTTGATTCGGGCGGTCGCCGC
CATACCTCTTTCAGTTCAGCCTTTGTCTATCCAGAAGTTGATGACGATATTGATATTGAAATTAACCCGGCAGACCTGCG
TATTGACGTTTACCGTGCATCCGGTGCGGGTGGTCAGCACGTCAACAAAACAGAATCTGCGGTGCGAATTACTCATATTC
CAACCAATATCGTGACTCAATGCCAGAATGACCGTTCGCAGCATAAAAACAAAGATCAAGCGATGAAACAGCTGAAAGCT
AAGCTGTATGAGTTTGAGATGCAAAAGAAAAATGCTGATAAACAGGTTTTGGAAGACAATAAGTCCGATATCGGCTGGGG
TAGCCAGATCCGTTCTTATGTATTGGATGACTCCCGTATTAAAGATTTGCGTACCGGTGTGGAAACACGCAACACGCAAG
CTGTACTGGATGGCGATCTGGACAAATTTATTGAAGCAAGCTTGAAAGCCGGGCTATGA

Upstream 100 bases:

>100_bases
CAAATATAATCAACCTGCTATAAACTGTCGTACAGATCCGTTAGAATTATCGGTTCTCATGACATTCCGTCATCTACGAC
ACAACGTAAGACTTTAAATC

Downstream 100 bases:

>100_bases
GGAACTGAGATGTCAGAGCAAAAACCACAAGTCGCTGAGCAAGCGCAAGAACTCAATAGTGAGTTACAAGCCCGTCGAGA
AAAACTGGCTGTCTTACGGG

Product: peptide chain release factor 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>365_residues
MFEINPVKNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDV
SGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRG
FKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLR
IDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWG
SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL

Sequences:

>Translated_341_residues
S*PGFQACFNKFVQIAIQYSLRVACFHTGTQIFNTGVIQYIRTDLATPADIGLIVFQNLFISIFLLHLKLIQLSFQLFHR
LIFVFMLRTVILALSHDIGWNMSNSHRRFCFVDVLTTRTGCTVNVNTQVCRVNFNINIVINFWIDKG*TERGMAATARIK
WAFTYQTVYASFST*PTEGIFTNYFDGGRFQTSNITVRFFDDLSFKASRLSPAQVHTQ*HTGPVLSFSATRACL*VQIAV
GAIIFAREHTTEFELAQLAIKNL*LSNCFVKGFFIISFNG*FQQAGHVFQALL*LINGGDNLFQRRTLFAQRLSAFGFIP
DVGLFQLGVYFFQSLFLGIIV
>Mature_341_residues
S*PGFQACFNKFVQIAIQYSLRVACFHTGTQIFNTGVIQYIRTDLATPADIGLIVFQNLFISIFLLHLKLIQLSFQLFHR
LIFVFMLRTVILALSHDIGWNMSNSHRRFCFVDVLTTRTGCTVNVNTQVCRVNFNINIVINFWIDKG*TERGMAATARIK
WAFTYQTVYASFST*PTEGIFTNYFDGGRFQTSNITVRFFDDLSFKASRLSPAQVHTQ*HTGPVLSFSATRACL*VQIAV
GAIIFAREHTTEFELAQLAIKNL*LSNCFVKGFFIISFNG*FQQAGHVFQALL*LINGGDNLFQRRTLFAQRLSAFGFIP
DVGLFQLGVYFFQSLFLGIIV

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37509; Mature: 37509

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
SPGFQACFNKFVQIAIQYSLRVACFHTGTQIFNTGVIQYIRTDLATPADIGLIVFQNLFI
CCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SIFLLHLKLIQLSFQLFHRLIFVFMLRTVILALSHDIGWNMSNSHRRFCFVDVLTTRTGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC
TVNVNTQVCRVNFNINIVINFWIDKGTERGMAATARIKWAFTYQTVYASFSTPTEGIFTN
EEEECCEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEC
YFDGGRFQTSNITVRFFDDLSFKASRLSPAQVHTQHTGPVLSFSATRACLVQIAVGAIIF
CCCCCEEEECCEEEEEECCCCCHHCCCCCHHEECCCCCCEEEEHHHHHHHHHHHHHHHEE
AREHTTEFELAQLAIKNLLSNCFVKGFFIISFNGFQQAGHVFQALLLINGGDNLFQRRTL
EECCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHEEHHEEECCCHHHHHHHH
FAQRLSAFGFIPDVGLFQLGVYFFQSLFLGIIV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA