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The map label for this gene is cadC [C]

Identifier: 218927984

GI number: 218927984

Start: 884191

End: 884907

Strand: Reverse

Name: cadC [C]

Synonym: YPO0804

Alternate gene names: 218927984

Gene position: 884907-884191 (Counterclockwise)

Preceding gene: 218927986

Following gene: 218927983

Centisome position: 19.02

GC content: 33.33

Gene sequence:

>717_bases
ATGAATACGATAGTGATTAATGATGTTTTTTTTACGCCACAAAAGAGAACGATTGATAGGAATGGAAAGGTAACTAAAAT
AAGAAACAAAGAATCCGAACTATTATCTTTACTTTGTGAGTATTATCCAGAGCCGATATCAAGGGAGGATATTGAGAAGA
GACTCTGGGAGGGGAGTTATGTTACTGATAATACATTGACTCAGACGATCAGTAATCTACGTCATGCACTTGATGATAAA
AAACATGAGTTAGTGGTTACTATTCCTAAAAAGGGGTATCGTATCGGTATTAAACCTGAAATTTTCATAGAGGGTGAAGT
TCAATGTCAACCTTATGAAAAATTGGGAATAATAGGTTCATCTGTGGATAAAATGGCAATGTCTTTTTTAAAAGGAAAAA
TGTCATTTTATAGAGTCTGCCTATTTGTACTTGGTGTTATTTTCTTTTTTATATTTTTTAATGTGGCTTTGTACCGTTAT
CAAGTAAAGTTAGTAGATGTCAACTCTTTACCGATATTAATTAATTTGGATAAAGAACAAGATAAAACGTTTTTATCTGT
TTATCAGCAGCATCCTTATGTTTTACTGAAAAAGAAAAAAATGGCGGCTATGTTGTTTGTAAACGCCAGGGAGACGAGTT
GGTATGCGAAAAAAATAATTTATTCGATATTGTTTTCTATTCTCCTTGGGGGAGGGGGGGGGCAATTATTGGTATGA

Upstream 100 bases:

>100_bases
TTAAATATAAAAAATCGTTTTATTAATAATTACAATTAGTTTTTCTTTGTTAGGATTACACTCAATGCTGAAATTTTAAA
CCAAAAACAATAAGAATATA

Downstream 100 bases:

>100_bases
TTTATGCCTATATACATCCGATGAAAAATCTTGAAGGCTACTGGGAGGGAAATTACCTATTAAGAACTGATAGTGGTAAT
TATCATATTTTTTCCCGTGT

Product: putative regulatory membrane protein

Products: NA

Alternate protein names: Transcriptional Regulator CadC; Reguatory Protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSYVTDNTLTQTISNLRHALDDK
KHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRY
QVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKKMAAMLFVNARETSWYAKKIIYSILFSILLGGGGGQLLV

Sequences:

>Translated_238_residues
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSYVTDNTLTQTISNLRHALDDK
KHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRY
QVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKKMAAMLFVNARETSWYAKKIIYSILFSILLGGGGGQLLV
>Mature_238_residues
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSYVTDNTLTQTISNLRHALDDK
KHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRY
QVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKKMAAMLFVNARETSWYAKKIIYSILFSILLGGGGGQLLV

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27513; Mature: 27513

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSY
CCEEEEEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
VTDNTLTQTISNLRHALDDKKHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGS
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCEEEEECCEEECCHHHHCCCCC
SVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRYQVKLVDVNSLPILINLDKEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCCCH
DKTFLSVYQQHPYVLLKKKKMAAMLFVNARETSWYAKKIIYSILFSILLGGGGGQLLV
HHHHHHHHHCCCEEEEEHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSY
CCEEEEEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
VTDNTLTQTISNLRHALDDKKHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGS
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCEEEEECCEEECCHHHHCCCCC
SVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRYQVKLVDVNSLPILINLDKEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCCCH
DKTFLSVYQQHPYVLLKKKKMAAMLFVNARETSWYAKKIIYSILFSILLGGGGGQLLV
HHHHHHHHHCCCEEEEEHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA