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The map label for this gene is ydhP [H]

Identifier: 218927978

GI number: 218927978

Start: 877782

End: 878942

Strand: Reverse

Name: ydhP [H]

Synonym: YPO0798

Alternate gene names: 218927978

Gene position: 878942-877782 (Counterclockwise)

Preceding gene: 218927979

Following gene: 218927976

Centisome position: 18.89

GC content: 53.66

Gene sequence:

>1161_bases
ATGCCTGTTGCACTACTGGCGTTGGCGCTGTGTGCTTTTGCTATTGGTACTACTGAATTTGTCATTATGGGGTTATTGCC
CCAGGTAGCGGGTGATTTGCACATATCGATTCCAACTGCGGGCTGGTTGATCAGTGGTTATGCGCTAGGTGTGGCAATTG
GCGCGCCCATCATGGCAGTGCTGACCGCGAAATTACCGCGCAAGAAGACACTGTTACTGTTAATGGTGATTTTTATCATC
GGTAACCTGATGTGTGCCTTGGCATACAGTTATGACTTCCTGATGTTCGCGCGAGTGATCACCGCGTTGTGTCATGGGGC
CTTTTTTGGTATCGGCGCGGTGGTCGCCGCAAATCTGGTGGCACCAAACCGGCGGGCCTCGGCGGTGGCACTGATGTTTA
CGGGGCTGACGCTGGCGAATGTATTGGGTGTCCCACTGGGGACCGCTCTAGGTCAGGCTTTTGGCTGGCGTTCGACATTT
TGGGTGGTATCGGTCATCGGTTTGTTCTCGTTGGCAGCCCTGTATAGCAAGTTGCCCTCCTCCAGCGAGGAAGCACCGAC
TGAGCTTCGTAAGGAGATTGCCGCTTTGCGTGGCGGTGGAATTTGGCTCTCCTTACTGATGACCGTATTTTTTGCCGCAG
CCATGTTTGCGCTCTTTACCTACATCGCCCCCATTTTGACGGAGGTCACACAGGTTTCTGAGCATGGCGTCAGTTGGACG
TTACTGCTAATGGGGGTTGGCTTGACGCTCGGTAATATCGTCGGGGGCAGGCTAGCTGACTGGCGTTTATCGGTCAGTTT
AACCATGACATTCTTGTTGATCGCGGTATTTTCTGCCCTGTTTAGTTGGACCAGTTATTCACTGTTGGCGGCGGAAGTGA
CACTGTTTTTGTGGTCAGCCGCCGCATTTTCTGCAGTGCCTGCGTTGCAAATTAATGTCGTCGCTTATGGCAAGAAAGCC
CCTAATCTGGTGTCAACGCTGAATATTGCGGCCTTTAATGTGGGTAACGCCTTAGGGGCGTGGGTCGGGGGGGTTGTGAT
TGCCAAAGGGCTTGGTTTGACGGCGGTGCCGCTGGCCGCCGCGGCACTGGCGGTCATGGGGTTGTTGCTGTGTCTGTTTA
CCTTTTCCCGCGCGCGTACTATTGGGAATAAAATGGCTTAG

Upstream 100 bases:

>100_bases
TACCCACTACACCGTGTCCATTAATTAACCATTATTGGCGATAAATTGATCTGCCTGCCACTGAGTGTGGGTGGATATTG
TCTGACTGGGAGCTTGTATT

Downstream 100 bases:

>100_bases
CACGCAGGGGCAATGACTGTTGCCAGACGCTGTTGGAAAAGCGTTGTCTGCTGTTTTAAGTGCCCGACAAACGTATCGAC
CAAGGTGGATGATGGGCGAT

Product: putative sugar transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MPVALLALALCAFAIGTTEFVIMGLLPQVAGDLHISIPTAGWLISGYALGVAIGAPIMAVLTAKLPRKKTLLLLMVIFII
GNLMCALAYSYDFLMFARVITALCHGAFFGIGAVVAANLVAPNRRASAVALMFTGLTLANVLGVPLGTALGQAFGWRSTF
WVVSVIGLFSLAALYSKLPSSSEEAPTELRKEIAALRGGGIWLSLLMTVFFAAAMFALFTYIAPILTEVTQVSEHGVSWT
LLLMGVGLTLGNIVGGRLADWRLSVSLTMTFLLIAVFSALFSWTSYSLLAAEVTLFLWSAAAFSAVPALQINVVAYGKKA
PNLVSTLNIAAFNVGNALGAWVGGVVIAKGLGLTAVPLAAAALAVMGLLLCLFTFSRARTIGNKMA

Sequences:

>Translated_386_residues
MPVALLALALCAFAIGTTEFVIMGLLPQVAGDLHISIPTAGWLISGYALGVAIGAPIMAVLTAKLPRKKTLLLLMVIFII
GNLMCALAYSYDFLMFARVITALCHGAFFGIGAVVAANLVAPNRRASAVALMFTGLTLANVLGVPLGTALGQAFGWRSTF
WVVSVIGLFSLAALYSKLPSSSEEAPTELRKEIAALRGGGIWLSLLMTVFFAAAMFALFTYIAPILTEVTQVSEHGVSWT
LLLMGVGLTLGNIVGGRLADWRLSVSLTMTFLLIAVFSALFSWTSYSLLAAEVTLFLWSAAAFSAVPALQINVVAYGKKA
PNLVSTLNIAAFNVGNALGAWVGGVVIAKGLGLTAVPLAAAALAVMGLLLCLFTFSRARTIGNKMA
>Mature_385_residues
PVALLALALCAFAIGTTEFVIMGLLPQVAGDLHISIPTAGWLISGYALGVAIGAPIMAVLTAKLPRKKTLLLLMVIFIIG
NLMCALAYSYDFLMFARVITALCHGAFFGIGAVVAANLVAPNRRASAVALMFTGLTLANVLGVPLGTALGQAFGWRSTFW
VVSVIGLFSLAALYSKLPSSSEEAPTELRKEIAALRGGGIWLSLLMTVFFAAAMFALFTYIAPILTEVTQVSEHGVSWTL
LLMGVGLTLGNIVGGRLADWRLSVSLTMTFLLIAVFSALFSWTSYSLLAAEVTLFLWSAAAFSAVPALQINVVAYGKKAP
NLVSTLNIAAFNVGNALGAWVGGVVIAKGLGLTAVPLAAAALAVMGLLLCLFTFSRARTIGNKMA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=373, Percent_Identity=45.3083109919571, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1786595, Length=386, Percent_Identity=36.7875647668394, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI1787808, Length=342, Percent_Identity=30.4093567251462, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI145693198, Length=359, Percent_Identity=25.3481894150418, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40367; Mature: 40236

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVALLALALCAFAIGTTEFVIMGLLPQVAGDLHISIPTAGWLISGYALGVAIGAPIMAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
LTAKLPRKKTLLLLMVIFIIGNLMCALAYSYDFLMFARVITALCHGAFFGIGAVVAANLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRASAVALMFTGLTLANVLGVPLGTALGQAFGWRSTFWVVSVIGLFSLAALYSKLPS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SSEEAPTELRKEIAALRGGGIWLSLLMTVFFAAAMFALFTYIAPILTEVTQVSEHGVSWT
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLLMGVGLTLGNIVGGRLADWRLSVSLTMTFLLIAVFSALFSWTSYSLLAAEVTLFLWSA
HHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFSAVPALQINVVAYGKKAPNLVSTLNIAAFNVGNALGAWVGGVVIAKGLGLTAVPLAA
HHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
AALAVMGLLLCLFTFSRARTIGNKMA
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PVALLALALCAFAIGTTEFVIMGLLPQVAGDLHISIPTAGWLISGYALGVAIGAPIMAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
LTAKLPRKKTLLLLMVIFIIGNLMCALAYSYDFLMFARVITALCHGAFFGIGAVVAANLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRASAVALMFTGLTLANVLGVPLGTALGQAFGWRSTFWVVSVIGLFSLAALYSKLPS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SSEEAPTELRKEIAALRGGGIWLSLLMTVFFAAAMFALFTYIAPILTEVTQVSEHGVSWT
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLLMGVGLTLGNIVGGRLADWRLSVSLTMTFLLIAVFSALFSWTSYSLLAAEVTLFLWSA
HHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFSAVPALQINVVAYGKKAPNLVSTLNIAAFNVGNALGAWVGGVVIAKGLGLTAVPLAA
HHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
AALAVMGLLLCLFTFSRARTIGNKMA
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]