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The map label for this gene is fliD [H]

Identifier: 218927926

GI number: 218927926

Start: 800017

End: 801294

Strand: Direct

Name: fliD [H]

Synonym: YPO0740

Alternate gene names: 218927926

Gene position: 800017-801294 (Clockwise)

Preceding gene: 218927925

Following gene: 218927927

Centisome position: 17.19

GC content: 41.78

Gene sequence:

>1278_bases
ATGATAACCGTTGAACCAGAAAAGCAGGCCGCATTTAGTGCTGATAAAACTGTATTCAGGAAGAGAAACCGTTTAGAGGC
ACAACAAAAACAGATTAATAGTCAGAAGGTGAGTTCTAATAAATTACAAACGTCAGTCACTGATTTTCGTTCGGCATTGA
ATCAATTAAATCAACGGGATTCTGGGCTGCTGAAAATAAAAACCACCAGTAGCGACGATAAACTGGTAAGCGCCAGTGCA
ACCGCACAAGCGGTAAAAGGCAAATATCATTTATTCGTCGAGCAATTAGCCAAGACAGACCAGATTGCTCTAAAGGGGAT
TACTGATAACCAATTAACGTTAGCAGCAGGCCCAATAGATCTGTCCGTAGGTAAAACCACATTAACCGTTGATTTAACCT
CGGTAAATAGCCTGGAAGAGTTAGCGAATGCCATTAACAATGCCAGTGATAAGGCTAAAAATAGCGATGGGCAAGGAATT
ACCGCCTCATTAGTGCGTACCGGCAGTGATGTGGTGTTAACGCTGAGCAGCAATAAAAGCGGTGCAGCCCATAAACTGGA
TGTGAGTAAGTTAACTACCAAAATTAGCGCAGCAACAGAGCAGCAACTGGCCGCCGGGCAAGATGCTATTGTCTGGCTAG
GGGAACAGAATAAAGGGATAAAGATAACGCACGATACAAATGTATTGGATAAGGCGATTCAGGGGCTTACTTTGTCATTG
CAGAAAGAAAAGGTTGCGGTTGAGGTGGGCGTTGAAATCGATAATGAGGCCAGCGAAGAGCAACTGAAAACGTTTGTCTC
CAAGTTTAATCAATTGCAAAAACTGGTGGAGTCCTCATCCTCGGTACCCAATGCCAGCGCTATCAGTACCCTATTGAATA
ACATTATCAGAAGCCCAATTGATGGCGAACGTATTTATGCTTTCGGTGTGACGAGTGGGCGAGACGGTGAATTAACCATC
GACAGCAAACAATTGCAACAAACATTGAGTTCCAATACGCAGCATTTCAATGAATTTTTCAATGGCAAGAATGGGGTCGT
CAATAAATTAACGGAAGCATTAGAACCTTATATCAATGTCACGTCGGGTTTATTCAAACTGGATAATGATCGATTAAGTC
TGGATATTACCGCTATCGAGAAAGAGCTGAAGGTTGTTAAAGATGACTATGATAATGCATACGATAAGTATTTGGTGGTA
TACACGGGGATAAGAAATATGCTCACCAAAATGAACGCTACCTTAGAATTATTTAAACCAGAAAAAGAGCAGAAATAA

Upstream 100 bases:

>100_bases
CCCTACGTTAAATAAATTCAATGGATATCAATAAATTGATTATTGGCATGTGTTTTGCTTAACGTGAAGTGTAAAAATAA
AATATAAAATAGGAGTTGTT

Downstream 100 bases:

>100_bases
AGAGAATTTATGATGTATGACGAACCGATGGCAGGATTATATCAACAAACAGATATCGCTATTCAGGCGGCGGCAACGCC
GCATCAATTAGTTATGATGC

Product: putative flagellar hook-associated protein

Products: NA

Alternate protein names: HAP2; Filament CAP protein [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MITVEPEKQAAFSADKTVFRKRNRLEAQQKQINSQKVSSNKLQTSVTDFRSALNQLNQRDSGLLKIKTTSSDDKLVSASA
TAQAVKGKYHLFVEQLAKTDQIALKGITDNQLTLAAGPIDLSVGKTTLTVDLTSVNSLEELANAINNASDKAKNSDGQGI
TASLVRTGSDVVLTLSSNKSGAAHKLDVSKLTTKISAATEQQLAAGQDAIVWLGEQNKGIKITHDTNVLDKAIQGLTLSL
QKEKVAVEVGVEIDNEASEEQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPIDGERIYAFGVTSGRDGELTI
DSKQLQQTLSSNTQHFNEFFNGKNGVVNKLTEALEPYINVTSGLFKLDNDRLSLDITAIEKELKVVKDDYDNAYDKYLVV
YTGIRNMLTKMNATLELFKPEKEQK

Sequences:

>Translated_425_residues
MITVEPEKQAAFSADKTVFRKRNRLEAQQKQINSQKVSSNKLQTSVTDFRSALNQLNQRDSGLLKIKTTSSDDKLVSASA
TAQAVKGKYHLFVEQLAKTDQIALKGITDNQLTLAAGPIDLSVGKTTLTVDLTSVNSLEELANAINNASDKAKNSDGQGI
TASLVRTGSDVVLTLSSNKSGAAHKLDVSKLTTKISAATEQQLAAGQDAIVWLGEQNKGIKITHDTNVLDKAIQGLTLSL
QKEKVAVEVGVEIDNEASEEQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPIDGERIYAFGVTSGRDGELTI
DSKQLQQTLSSNTQHFNEFFNGKNGVVNKLTEALEPYINVTSGLFKLDNDRLSLDITAIEKELKVVKDDYDNAYDKYLVV
YTGIRNMLTKMNATLELFKPEKEQK
>Mature_425_residues
MITVEPEKQAAFSADKTVFRKRNRLEAQQKQINSQKVSSNKLQTSVTDFRSALNQLNQRDSGLLKIKTTSSDDKLVSASA
TAQAVKGKYHLFVEQLAKTDQIALKGITDNQLTLAAGPIDLSVGKTTLTVDLTSVNSLEELANAINNASDKAKNSDGQGI
TASLVRTGSDVVLTLSSNKSGAAHKLDVSKLTTKISAATEQQLAAGQDAIVWLGEQNKGIKITHDTNVLDKAIQGLTLSL
QKEKVAVEVGVEIDNEASEEQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPIDGERIYAFGVTSGRDGELTI
DSKQLQQTLSSNTQHFNEFFNGKNGVVNKLTEALEPYINVTSGLFKLDNDRLSLDITAIEKELKVVKDDYDNAYDKYLVV
YTGIRNMLTKMNATLELFKPEKEQK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46372; Mature: 46372

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVEPEKQAAFSADKTVFRKRNRLEAQQKQINSQKVSSNKLQTSVTDFRSALNQLNQRD
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
SGLLKIKTTSSDDKLVSASATAQAVKGKYHLFVEQLAKTDQIALKGITDNQLTLAAGPID
CCEEEEEECCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCEEEEECCEE
LSVGKTTLTVDLTSVNSLEELANAINNASDKAKNSDGQGITASLVRTGSDVVLTLSSNKS
EECCCEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCEEHHHHHCCCCEEEEEECCCC
GAAHKLDVSKLTTKISAATEQQLAAGQDAIVWLGEQNKGIKITHDTNVLDKAIQGLTLSL
CCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHCCCEEEE
QKEKVAVEVGVEIDNEASEEQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPI
ECCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
DGERIYAFGVTSGRDGELTIDSKQLQQTLSSNTQHFNEFFNGKNGVVNKLTEALEPYINV
CCCEEEEEECCCCCCCCEEECHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TSGLFKLDNDRLSLDITAIEKELKVVKDDYDNAYDKYLVVYTGIRNMLTKMNATLELFKP
HHHHEEECCCEEEEEHHHHHHHHHHHHHCCCCHHHCEEEEHHHHHHHHHHHCCHHEEECC
EKEQK
CCCCC
>Mature Secondary Structure
MITVEPEKQAAFSADKTVFRKRNRLEAQQKQINSQKVSSNKLQTSVTDFRSALNQLNQRD
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
SGLLKIKTTSSDDKLVSASATAQAVKGKYHLFVEQLAKTDQIALKGITDNQLTLAAGPID
CCEEEEEECCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCEEEEECCEE
LSVGKTTLTVDLTSVNSLEELANAINNASDKAKNSDGQGITASLVRTGSDVVLTLSSNKS
EECCCEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCEEHHHHHCCCCEEEEEECCCC
GAAHKLDVSKLTTKISAATEQQLAAGQDAIVWLGEQNKGIKITHDTNVLDKAIQGLTLSL
CCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHCCCEEEE
QKEKVAVEVGVEIDNEASEEQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPI
ECCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
DGERIYAFGVTSGRDGELTIDSKQLQQTLSSNTQHFNEFFNGKNGVVNKLTEALEPYINV
CCCEEEEEECCCCCCCCEEECHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TSGLFKLDNDRLSLDITAIEKELKVVKDDYDNAYDKYLVVYTGIRNMLTKMNATLELFKP
HHHHEEECCCEEEEEHHHHHHHHHHHHHCCCCHHHCEEEEHHHHHHHHHHHCCHHEEECC
EKEQK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]