Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is flgE [H]
Identifier: 218927912
GI number: 218927912
Start: 783939
End: 785180
Strand: Direct
Name: flgE [H]
Synonym: YPO0725
Alternate gene names: 218927912
Gene position: 783939-785180 (Clockwise)
Preceding gene: 218927911
Following gene: 218927914
Centisome position: 16.85
GC content: 50.97
Gene sequence:
>1242_bases ATGAGTTTTAGTATCGCTAATACCGCGTTGAATGCACATACCGAACAGTTGAACACCATCAGTAACAATATTGCCAACTC GGCAACCAAAGGCTTTAAAGCCAGTCGTACTGAATTCTCGTCTATGTATGCTCAGTCGCAGCCACTGGGGGTCGCGGTCA GCGGCGTGTCACAAAATATCAGCAAAGACGGCCAAAAAGAAAAAACTGGCATGGGGCTGGATCTGGCGATCAGCGGCGGA GGTTTCTTTGTGGTGCGTGAAAGCTCGGGGGATAAGGCCTATACCCGCGCGGGCATGTTCCGGTCCGATGTGGATGGCTA TCTGGTTAACGGCCAGGGCATGAAATTACAGGGCTACCCGGCGGATGCTGCCGGTAATATCCAGGCGGGCATCATCAGTG ATTTGAAAATTAACAATGCGGGTGTGCCAGCTAAAGCATCAGAACAGCTTGATTTTATGGCTAATCTGAATGCCAGTGTA ACGGCACCATCAGTCAGCGTTTTCAATCCTACCAATGAGAAAAGTTACAACTTCACCACGACGTCGACGGTTTATGATTC TCTGGGGCGGGAACATGCGGTCGCTCACTATTTTGTTAAATCAACGACTCCTCCTGCAGGTTCTGTCGCGAGTGAGTGGG CGGTTCACCATACCGTTGATGGGGGAACGGCGACTCCTCCCCTGACATTGCAATTTACCGATACCGGAGCGTTGATACCG GGTATTCCTGCCGCTGGTAGCGGTATGAAAGGTAGCGCTATTAATCTTCATGGCACTTTCAATCCAGCGGGTGCTGCTGA TTATGATATCGATATTGATTACACCGGCACCACGCAGCTTAGCCAAGGGTTTACCACCACTCGCAATAAAAGTGATGGGT ATACCTCGGGTGTTAAAAATGCTGAACGGATTGAAAGTGACGGCTCGGTGTATGCCACCTTCAGTAATGGCGAAAGAGTG TTGCAGGGCAAAGTGGTACTCGCGAACTTCGCCAGCCCAAGTGGCCTGGTGACGCAAAATGGCACGAGCTGGAGCGAGAG CAATAAATCCGGTGCGGCGTTGTTGGGCACACCTGGCACGGGGTTATTGGGTAGCCTTGAATCCGGCGCGTTAGAAAATT CCAATGTGGATATTACCGCAGAACTGGTAGGGCTGATGACCGCCCAACGTAACTATCAGGCCAGCACCAAAATCATCAGC ACCAATGACAGCATGATGAATGCACTGTTCCAGGTGCTGTAA
Upstream 100 bases:
>100_bases TCTTGGCGAGGTTTCATACAGCCAAATCACACAATTCGGGGCCTAGCCCGCACGGTCAATATCACCCTATTAATCCATCT TATTTATACGGAAATATGTT
Downstream 100 bases:
>100_bases TGGATAAGCTTCTGTATACCGCCGTCAGCGGGGCGAATCGCAGCCTGTCACAACAACAGATCCATGCCAATAATCTGGCG AACAGCAATACGCAGGGGTT
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQSQPLGVAVSGVSQNISKDGQKEKTGMGLDLAISGG GFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKLQGYPADAAGNIQAGIISDLKINNAGVPAKASEQLDFMANLNASV TAPSVSVFNPTNEKSYNFTTTSTVYDSLGREHAVAHYFVKSTTPPAGSVASEWAVHHTVDGGTATPPLTLQFTDTGALIP GIPAAGSGMKGSAINLHGTFNPAGAADYDIDIDYTGTTQLSQGFTTTRNKSDGYTSGVKNAERIESDGSVYATFSNGERV LQGKVVLANFASPSGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQASTKIIS TNDSMMNALFQVL
Sequences:
>Translated_413_residues MSFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQSQPLGVAVSGVSQNISKDGQKEKTGMGLDLAISGG GFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKLQGYPADAAGNIQAGIISDLKINNAGVPAKASEQLDFMANLNASV TAPSVSVFNPTNEKSYNFTTTSTVYDSLGREHAVAHYFVKSTTPPAGSVASEWAVHHTVDGGTATPPLTLQFTDTGALIP GIPAAGSGMKGSAINLHGTFNPAGAADYDIDIDYTGTTQLSQGFTTTRNKSDGYTSGVKNAERIESDGSVYATFSNGERV LQGKVVLANFASPSGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQASTKIIS TNDSMMNALFQVL >Mature_412_residues SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQSQPLGVAVSGVSQNISKDGQKEKTGMGLDLAISGGG FFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKLQGYPADAAGNIQAGIISDLKINNAGVPAKASEQLDFMANLNASVT APSVSVFNPTNEKSYNFTTTSTVYDSLGREHAVAHYFVKSTTPPAGSVASEWAVHHTVDGGTATPPLTLQFTDTGALIPG IPAAGSGMKGSAINLHGTFNPAGAADYDIDIDYTGTTQLSQGFTTTRNKSDGYTSGVKNAERIESDGSVYATFSNGERVL QGKVVLANFASPSGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQASTKIIST NDSMMNALFQVL
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=423, Percent_Identity=39.0070921985816, Blast_Score=235, Evalue=3e-63, Organism=Escherichia coli, GI1787318, Length=143, Percent_Identity=34.2657342657343, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 42903; Mature: 42772
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQSQPLGVAVSGVSQNI CCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCHHHH SKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKLQGYP HCCCCHHHCCCCEEEEEECCEEEEEEECCCCCHHHHHCCHHCCCCCEEECCCCEEEECCC ADAAGNIQAGIISDLKINNAGVPAKASEQLDFMANLNASVTAPSVSVFNPTNEKSYNFTT CCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHEECCCCEEECCEEEEECCCCCCCEEEEE TSTVYDSLGREHAVAHYFVKSTTPPAGSVASEWAVHHTVDGGTATPPLTLQFTDTGALIP HHHHHHHCCCHHEEEEEEEECCCCCCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCCCC GIPAAGSGMKGSAINLHGTFNPAGAADYDIDIDYTGTTQLSQGFTTTRNKSDGYTSGVKN CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCC AERIESDGSVYATFSNGERVLQGKVVLANFASPSGLVTQNGTSWSESNKSGAALLGTPGT HHHHCCCCCEEEEECCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEECCCC GLLGSLESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL CCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHC >Mature Secondary Structure SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQSQPLGVAVSGVSQNI CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCHHHH SKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKLQGYP HCCCCHHHCCCCEEEEEECCEEEEEEECCCCCHHHHHCCHHCCCCCEEECCCCEEEECCC ADAAGNIQAGIISDLKINNAGVPAKASEQLDFMANLNASVTAPSVSVFNPTNEKSYNFTT CCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHEECCCCEEECCEEEEECCCCCCCEEEEE TSTVYDSLGREHAVAHYFVKSTTPPAGSVASEWAVHHTVDGGTATPPLTLQFTDTGALIP HHHHHHHCCCHHEEEEEEEECCCCCCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCCCC GIPAAGSGMKGSAINLHGTFNPAGAADYDIDIDYTGTTQLSQGFTTTRNKSDGYTSGVKN CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCC AERIESDGSVYATFSNGERVLQGKVVLANFASPSGLVTQNGTSWSESNKSGAALLGTPGT HHHHCCCCCEEEEECCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEECCCC GLLGSLESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL CCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]