| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927892
Identifier: 218927892
GI number: 218927892
Start: 766012
End: 766581
Strand: Reverse
Name: 218927892
Synonym: YPO0703
Alternate gene names: NA
Gene position: 766581-766012 (Counterclockwise)
Preceding gene: 218927893
Following gene: 218927890
Centisome position: 16.47
GC content: 48.25
Gene sequence:
>570_bases ATGAAAATAAAACGTGCTGCTGGACTGCCCCTGCTTCTAATACTCACCGCTTGCCAAACCTCCCCTTTACTGCAGTCAGC GGAAATAAACAAGAGAGCCACTCAGGGAAAATGGAGTTTCACATTTGTTACCCCAGAGTCACAGCCTGCACAGGTGACCT ACGCCCGTATAGTGGACACTGCAGATAACCTGCACCCGTTTAATACACGGGACATGACACAAAATAGCCCATCTCAAATG GGAGAGTCGGGTGAATTAATACACCAAACATCGATTCATTTTAATCAGACGAACTCCCCGCCTCAATCTATGGTGTTCTG CTGGAATTCGATTGCCGATAAAAAAGTGTACGAGACCCATCTGGTTCTCCCGCAGTCCGTCAGACAAAGTATGATCACAC CCGCCAGAACAGGGAATACAACCCAATATAAAACGATGTTATTGGGCCTTTCTCCTGGCGGTAAAGTCCTTGTCTGGTTA CAGGACGAGGGAGGCCCGCAAAATAACCGCGTGCCAATCGTGAACATCAATACCCTCTCCGGCGATAAACTGGCGATTTG CAAGAGCTGA
Upstream 100 bases:
>100_bases ACGCTATAAACGCTATAAACGCTATAAACGCTATAAACGCTATAATAGTAGGTAACAGTAATGATAAAGAACAATAACAA CGACAACATGGATGGATAAA
Downstream 100 bases:
>100_bases CCTCGCAAGTACGGAAGAAGAGGGATCGCCACAGTAAGCGAGTATGAGATTACTGTGGCGATTTTATGGCCCTGTACCAG ATTATAGCTAATCAGTTATC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDTADNLHPFNTRDMTQNSPSQM GESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWL QDEGGPQNNRVPIVNINTLSGDKLAICKS
Sequences:
>Translated_189_residues MKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDTADNLHPFNTRDMTQNSPSQM GESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWL QDEGGPQNNRVPIVNINTLSGDKLAICKS >Mature_189_residues MKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDTADNLHPFNTRDMTQNSPSQM GESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWL QDEGGPQNNRVPIVNINTLSGDKLAICKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20836; Mature: 20836
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDT CCCCCCCCCCCEEEEEHHCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEC ADNLHPFNTRDMTQNSPSQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETH CCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCHHHEEEEEHHHCCCEEEEEE LVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWLQDEGGPQNNRVPIVNINTLS EECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECC GDKLAICKS CCEEEEECC >Mature Secondary Structure MKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDT CCCCCCCCCCCEEEEEHHCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEC ADNLHPFNTRDMTQNSPSQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETH CCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCHHHEEEEEHHHCCCEEEEEE LVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWLQDEGGPQNNRVPIVNINTLS EECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECC GDKLAICKS CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA