| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927884
Identifier: 218927884
GI number: 218927884
Start: 756287
End: 756709
Strand: Reverse
Name: 218927884
Synonym: YPO0695
Alternate gene names: NA
Gene position: 756709-756287 (Counterclockwise)
Preceding gene: 218927890
Following gene: 218927883
Centisome position: 16.26
GC content: 38.53
Gene sequence:
>423_bases ATGGATGTAATTAGATTATCGTTAATAGTATTAATCGTCTCTCAGCTATTATTTGTTTGTTACAGTGACATCCGCCACAG AATAATAAGCAATAAGTTTATTATTAGCATTTCATTCAATGCCATTATATTTAGTCTGGTAATGCACCATACTGTTAGTA TTATTATTCCTATCGTCGCCCTATTTATAGGCTATATTATTTTCCATTTCAACGTGATGGGCGGCGGCGATGTAAAATTG ATCACTGTACTCCTGCTGGCACTGACGGCAGAGCAGTCATTAAATTTTATCATCTACACAGCGGTCATGGGTGGCGTTGT TATGGTGGTGGGTTTATTGATCAACCGCGTTGATATCCAAAAACGTGGGGTTCCCTACGCCGTTGCTATCACTGCCGGAT TTCTATCATCTGTACTAATTTAA
Upstream 100 bases:
>100_bases AAGCTTTACTGAACCCCCAGCCTAGCTGGGGGTTTTCTGGGCACAATAAATATGGCAGCCATCTGCTGCCATATCTTTCA TCTCACTATTAGGTCTGACG
Downstream 100 bases:
>100_bases CTGGCTGAAATAAATTGATTTATCACGATAGCATGACAAAAGGTACGGATAATGAATCGAAAATTTCTTATATTATTTTC ACTCCTGATTGTTGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Tight Adherance Operon Protein
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDVIRLSLIVLIVSQLLFVCYSDIRHRIISNKFIISISFNAIIFSLVMHHTVSIIIPIVALFIGYIIFHFNVMGGGDVKL ITVLLLALTAEQSLNFIIYTAVMGGVVMVVGLLINRVDIQKRGVPYAVAITAGFLSSVLI
Sequences:
>Translated_140_residues MDVIRLSLIVLIVSQLLFVCYSDIRHRIISNKFIISISFNAIIFSLVMHHTVSIIIPIVALFIGYIIFHFNVMGGGDVKL ITVLLLALTAEQSLNFIIYTAVMGGVVMVVGLLINRVDIQKRGVPYAVAITAGFLSSVLI >Mature_140_residues MDVIRLSLIVLIVSQLLFVCYSDIRHRIISNKFIISISFNAIIFSLVMHHTVSIIIPIVALFIGYIIFHFNVMGGGDVKL ITVLLLALTAEQSLNFIIYTAVMGGVVMVVGLLINRVDIQKRGVPYAVAITAGFLSSVLI
Specific function: Unknown
COG id: COG4960
COG function: function code OU; Flp pilus assembly protein, protease CpaA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15389; Mature: 15389
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIRLSLIVLIVSQLLFVCYSDIRHRIISNKFIISISFNAIIFSLVMHHTVSIIIPIVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH LFIGYIIFHFNVMGGGDVKLITVLLLALTAEQSLNFIIYTAVMGGVVMVVGLLINRVDIQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KRGVPYAVAITAGFLSSVLI HCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDVIRLSLIVLIVSQLLFVCYSDIRHRIISNKFIISISFNAIIFSLVMHHTVSIIIPIVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH LFIGYIIFHFNVMGGGDVKLITVLLLALTAEQSLNFIIYTAVMGGVVMVVGLLINRVDIQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KRGVPYAVAITAGFLSSVLI HCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA