| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927883
Identifier: 218927883
GI number: 218927883
Start: 755369
End: 756235
Strand: Reverse
Name: 218927883
Synonym: YPO0694
Alternate gene names: NA
Gene position: 756235-755369 (Counterclockwise)
Preceding gene: 218927884
Following gene: 218927882
Centisome position: 16.25
GC content: 35.52
Gene sequence:
>867_bases ATGAATCGAAAATTTCTTATATTATTTTCACTCCTGATTGTTGCCATCGGAATCTCCGGCATTCTGTTAAACCCTGATAA AGAGATACCTGAATTACTGACTCAGACGGAGAAAAGAAAAGAGAGAAATATTGTATTAGCCCAAACACGCCATGACCTTA CCGCCGGTACATTAATATCCAAAGAAGATTATTCATTACAAAATATCACCGTAGATGAATCAAGCGACTTGGTTAAAAAT GATCTATCACATGGTCATAGAATTGATGGTGATAGCATTGCTGACGATAGAACTCATGATCATAAACTTGATGGTCATTT ATTAAAAAACAATATATTAGCTGGATCGTATATTATCGATGAAATGTTAATCTCGCCCGATAGTCGTGAATTTTCCCGGC TAAATTTAAAGCACGGGGAGATCATTTATAAATTTTACATTACGGAAAAAAACGAATACCTACTAAACACCTTAAATCCA GGTGACTTTCTTTCATTCCAATTACTGACACTTGAAACCAATAAAACAAAAGGAATGGAGAATGGTATTGCTATTGATAG CAAGAGTATGAGTAGCAAACAAAGGCAAAAGTATTCACTTAATAACGTGATACCTGACATGCCGATATTAAGCATTAAAA CATACTCTCCTGAGGAGTTATCAGTAAAAAACAACAAAAATAATAAGACTGAAGAGTATTCCCTAGGTTATATTGAAGTG ATAATGAAAATACAAGACCTCGAATTCATCCATACGGTGGAGAAAGCCGGCGAGGTGTTTTTAACCCCCAAGAGTGGCGA TCACAAACGAATAGATTTGGATGACATAATCCCTACGTTACAGACAATAAGAGAGCTAAGAGGATGA
Upstream 100 bases:
>100_bases CTACGCCGTTGCTATCACTGCCGGATTTCTATCATCTGTACTAATTTAACTGGCTGAAATAAATTGATTTATCACGATAG CATGACAAAAGGTACGGATA
Downstream 100 bases:
>100_bases ATCTATATCAACTAAAAGATAAAAAACAAAATATAATTATATTCTTGTCTATTGTTATTCTCTATTTTTTGTTTGAAAAT TCAGCTAACGCCAAGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tight Adherance Operon Protein
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGTLISKEDYSLQNITVDESSDLVKN DLSHGHRIDGDSIADDRTHDHKLDGHLLKNNILAGSYIIDEMLISPDSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNP GDFLSFQLLTLETNKTKGMENGIAIDSKSMSSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSLGYIEV IMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG
Sequences:
>Translated_288_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGTLISKEDYSLQNITVDESSDLVKN DLSHGHRIDGDSIADDRTHDHKLDGHLLKNNILAGSYIIDEMLISPDSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNP GDFLSFQLLTLETNKTKGMENGIAIDSKSMSSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSLGYIEV IMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG >Mature_288_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGTLISKEDYSLQNITVDESSDLVKN DLSHGHRIDGDSIADDRTHDHKLDGHLLKNNILAGSYIIDEMLISPDSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNP GDFLSFQLLTLETNKTKGMENGIAIDSKSMSSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSLGYIEV IMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32839; Mature: 32839
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGTLIS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEC KEDYSLQNITVDESSDLVKNDLSHGHRIDGDSIADDRTHDHKLDGHLLKNNILAGSYIID CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCEEHHHHHH EMLISPDSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNPGDFLSFQLLTLETNKTKGME HHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCC NGIAIDSKSMSSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSLGYIEV CCEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCHHHCCHHHHH IMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG HHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGTLIS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEC KEDYSLQNITVDESSDLVKNDLSHGHRIDGDSIADDRTHDHKLDGHLLKNNILAGSYIID CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCEEHHHHHH EMLISPDSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNPGDFLSFQLLTLETNKTKGME HHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCC NGIAIDSKSMSSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSLGYIEV CCEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCHHHCCHHHHH IMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG HHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA