| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218927876
Identifier: 218927876
GI number: 218927876
Start: 747849
End: 748355
Strand: Reverse
Name: 218927876
Synonym: YPO0685
Alternate gene names: NA
Gene position: 748355-747849 (Counterclockwise)
Preceding gene: 218927877
Following gene: 218927875
Centisome position: 16.08
GC content: 48.52
Gene sequence:
>507_bases GTGACTTTTATTATTGTTCTATTTATAAAACTGCTGATTGCCATCGCTGAATATCAGTCGATTTCCGGTAAGTTAGATCG TCTTTCATATTCAGCCGCGGGTATCATTCGTGAAAGGGGGCGGTTATATCCGCATGATCCTGAATTGAATCAACAGCAAG TTGATCAACTCAGAGATCTTGTTCAGCGTGCGTTACTGAACTCGGGTGTACCTGCTGATAACCTCAGGATGCGGGTAGAG ACATTACATTTTAACCCCATCGAGCCACCAGGTTCTCGTCAGCAACAGATTGATGAGCATAAGAGCCTGTCATTCAGTAC TGGCGATTGCTCCCCGGTTCAGCCACTCCGTGGGTTAGTTGCGCTGTCACCATTAAGCCAAAGTGAACGCTGGGTGCCGC TCTACCAGGTCACAATATGCCTGCCCCCCCCTCAGAGATACCGTGACCTGATTAGTGTCAGCCCCTTGCCAACATTGAAA TCATCGGCCATCACAATCGGGCGCTAA
Upstream 100 bases:
>100_bases TGGGTAAATACGTTATTGTCCAGGGAGGTGATTTTTGTTCAGGAAAAATAATACGTTAATCAATAATCAAGGTGGTGCAA TTATTGTTGAATTTGCATTT
Downstream 100 bases:
>100_bases ACAGCCTACGAATAAAGGTTATATATGCAGAAAAAAACAATGATAACTTTCATACTAGAGAAGTATGAGTTTTTTATTAA AAATAGACAGGGAGCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVE TLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPTLK SSAITIGR
Sequences:
>Translated_168_residues MTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVE TLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPTLK SSAITIGR >Mature_167_residues TFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVET LHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPTLKS SAITIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18882; Mature: 18751
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLRDL CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLV HHHHHHHCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH ALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPTLKSSAITIGR HCCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure TFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLRDL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLV HHHHHHHCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH ALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPTLKSSAITIGR HCCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA