| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is icc [H]
Identifier: 218927859
GI number: 218927859
Start: 725526
End: 726353
Strand: Direct
Name: icc [H]
Synonym: YPO0666
Alternate gene names: 218927859
Gene position: 725526-726353 (Clockwise)
Preceding gene: 218927858
Following gene: 218927860
Centisome position: 15.59
GC content: 50.24
Gene sequence:
>828_bases TTGGAAAGCCTGTTTAAACTGCCTATGGCGAGTGGGGCCAGGGTTAGAATTTTACAAATAACAGATACCCACCTCTTTGC TGGCGAACATGAGACATTGCTGGGTGTGAATACTTTTCACAGCTATCGCGCGGTATTGGACGCGATTATTGCGGAACAGC ACCCGTTTGATCTGGTTGTTGCCACGGGCGATTTGGCTCAGGACCACTCTGTCGCCGCCTATCAGAATTTTGCGAAGGGA ATATCTCGCCTGCCTGTGCCTTGCGTTTGGCTGCCCGGTAATCACGATTTCCAGCCAGCAATGTTTGATGCATTGGCTGA GGCGGGGATTGCCCCTTCAAAACAGGTTCTGGCGGGAGAACACTGGCAGATCCTGTTGCTGGACAGCCAAGTATTTGGCG TACCTTATGGTGAGTTGAGCGACTATCAGTTGGAGTGGATGGAGCGCTGTCTAATCGCGTATCCGGAACGTTACACCTTG ATATTGTTGCACCATCATCCTATGCCGTCAGGTTGCACCTGGCTTGATCAACACAGTTTGCGCAACGCGCATATGTTGGC GGCGATCCTGACTCGTTATCCCCGAGTTACTACGTTATTGTGCGGTCATATTCATCAAGATTTAGATCTTGACTGGTATG GTAAGCGCTTGCTAGCCAGCCCTTCGACCTGTGTGCAATTTAAACCACATTGTACTAACTTTACGCTTGATGCTGTGGCA CCAGGGTGGCGTTATCTCGATTTACTGCCTGACGGGGGGCTGGAAACTGAGGTTCATCGGTTAGACAGTGACGAATTTTG CCCTGATATGGACTCGGATGGTTATTGA
Upstream 100 bases:
>100_bases GGCCGTTCCGGTTTGTTAGACAGACTTATGGCCTTGCCTGCAGATAGTCATAATACGCATAACTATCTGGTTGGGGGGGC GGCAAAAACAAGGATACCAT
Downstream 100 bases:
>100_bases TGAGTACACTTTTATATATTCATGGTTTTAATAGCTCTCCCAGCTCAGCGAAAGCCACGGCGTTTAAAGAGTGGTTGCAG CAACACTATCCGCATATAGA
Product: cyclic 3',5'-adenosine monophosphate phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPFDLVVATGDLAQDHSVAAYQNFAKG ISRLPVPCVWLPGNHDFQPAMFDALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPERYTL ILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKRLLASPSTCVQFKPHCTNFTLDAVA PGWRYLDLLPDGGLETEVHRLDSDEFCPDMDSDGY
Sequences:
>Translated_275_residues MESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPFDLVVATGDLAQDHSVAAYQNFAKG ISRLPVPCVWLPGNHDFQPAMFDALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPERYTL ILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKRLLASPSTCVQFKPHCTNFTLDAVA PGWRYLDLLPDGGLETEVHRLDSDEFCPDMDSDGY >Mature_275_residues MESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPFDLVVATGDLAQDHSVAAYQNFAKG ISRLPVPCVWLPGNHDFQPAMFDALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPERYTL ILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKRLLASPSTCVQFKPHCTNFTLDAVA PGWRYLDLLPDGGLETEVHRLDSDEFCPDMDSDGY
Specific function: Affects the expression of the lacZ gene [H]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=275, Percent_Identity=70.5454545454545, Blast_Score=389, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 30933; Mature: 30933
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPFDLVV CCCHHCCCCCCCCEEEEEEEECCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEE ATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHDFQPAMFDALAEAGIAPSKQVLAGE EECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHCCC HWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPERYTLILLHHHPMPSGCTWLDQHSL CEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHC RNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKRLLASPSTCVQFKPHCTNFTLDAVA CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCHHHHCCCCCEEEECCCCCCEEEECCC PGWRYLDLLPDGGLETEVHRLDSDEFCPDMDSDGY CCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPFDLVV CCCHHCCCCCCCCEEEEEEEECCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEE ATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHDFQPAMFDALAEAGIAPSKQVLAGE EECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHCCC HWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPERYTLILLHHHPMPSGCTWLDQHSL CEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHC RNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKRLLASPSTCVQFKPHCTNFTLDAVA CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCHHHHCCCCCEEEECCCCCCEEEECCC PGWRYLDLLPDGGLETEVHRLDSDEFCPDMDSDGY CCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]