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The map label for this gene is ygiF [H]

Identifier: 218927845

GI number: 218927845

Start: 709742

End: 711049

Strand: Direct

Name: ygiF [H]

Synonym: YPO0652

Alternate gene names: 218927845

Gene position: 709742-711049 (Clockwise)

Preceding gene: 218927842

Following gene: 218927846

Centisome position: 15.25

GC content: 50.61

Gene sequence:

>1308_bases
ATGACCGTTGAAATAGAATTAAAATTTATTGCTACTCCTGCGGCCATTGCTGCTTTGCCGGAGTGGATTGAGTCCCAGAA
AAACCAGCATTTTCCCCCACAAACACTGGCCAATATCTATTTTGACACGGCGGATAAGCGGTTGCGCCAGAATGATATCG
GTTTACGTATCCGCGGCTATGATGGCCGTTATGAAATGACGGTAAAGACCGGCGGTAAGGTCGTGGGCGGTTTACATCAG
CGGCCTGAATATAATGTCGATATTGATAGCGACCAACTGGATTTAGCGCGTTTCCCGCAGGATATCTGGCCGGAAGGCTG
GGCGGTTGATTTGTTGCAAGCGGAATTACAGCCGTTGTTCCGTACTGATTTCACCCGCGAAAAGTGGGTAATCACTTACG
GTGAGAGCGAGATAGAACTTGCCCTCGACCAAGGTTCTATCAGCGCTGATACGTTGTCGGAACCGTTGAGTGAGATTGAA
CTGGAGCTGAAACAGGGCACTCAGGGCGATTTATTGGCACTGGCAGCCGAATTGGCAAAAATGGGTGGCTTACGCCAGAG
CAATTTGAGTAAGGCGGCACGTGGTTATCATCTGGCGCAAGGTAATCCGCCACGTGAGCTACGGCCTTTCCTGGTATTTC
AACCCGTGGCGAAATCAACGGTTGAGCAGGGGATGGCCGGTGGTTTGGAAAGCATATTGGAACACTGGCAATATCATGAA
GAGCTGTGGTTACGTGGGGAACCTGCGGCCAAAACCATGATTATCGACGCTTTGGCTATGGTTCGCCAATCGTTGGCTAT
TTTTGGCGGTTTGGTGCCACGGAAAGCCAGTACAGAGTTACGTGCGTTGCTGATTGCCCTTGAGCCGCAATTAGAGCCGA
AGAGTGTCGATGCAGCGTTGTTGTGTTACAGCGTTGACTATCTGAAATGTAAGTTGGCGCTTACATCATGGTTGATCACC
GCAGGCTGGCGGCCATTTATGGATGCCAAAGCACAAGCTAAGTTCGATGGCTCGTTTAAACGCTTCTGTGACATTATGCT
CAGCCGCAGTGCCGCCGATTTAAAAGAGGCTTTTGGCCACAATCTTGATGATGATGGCTATTTGGCACAACTCCCCCGTC
TGAACCGCCAGCTCATCGCCTTCCAACTGCTTTCTGGTTTCTATCCACAAAGTGAATGGCATCCGTATATCGATGCCTGG
TTTGGTTTACAGCAGGCGATTATGGCGCGCCAGGGCCACTGGCGAGATACTGCCCGCAAAGAAGCACTATCTCAGGCCGC
CTTTTGGTTAAACGGTGCTGTTCGCTAA

Upstream 100 bases:

>100_bases
GCGGGGGCCGCCAAGCGGGTTTATCTGTACAAAACAGGCAAATCGAAGCGAAAGGTGCATAATGCCCGTCATCTCGTAAC
ATACCGGTGTGAATGAAATT

Downstream 100 bases:

>100_bases
TCGAATATATAACCAAAGTTATTGGCGTTGCAGGGGGTTATTTATAAAAACAGCGCTACGGTATTTATAAGAAACAGCGC
TACGGCATTTATAAAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVGGLHQ
RPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIE
LELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHE
ELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTSWLIT
AGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAW
FGLQQAIMARQGHWRDTARKEALSQAAFWLNGAVR

Sequences:

>Translated_435_residues
MTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVGGLHQ
RPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIE
LELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHE
ELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTSWLIT
AGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAW
FGLQQAIMARQGHWRDTARKEALSQAAFWLNGAVR
>Mature_434_residues
TVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVGGLHQR
PEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIEL
ELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHEE
LWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTSWLITA
GWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAWF
GLQQAIMARQGHWRDTARKEALSQAAFWLNGAVR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=435, Percent_Identity=49.1954022988506, Blast_Score=407, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 48960; Mature: 48829

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGY
CEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC
DGRYEMTVKTGGKVVGGLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLF
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHH
RTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIELELKQGTQGDLLALAAELAK
HCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHE
HCCCCHHHHHHHHCCCCCCCCCCCHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHH
ELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAAL
HHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCCHHH
LCYSVDYLKCKLALTSWLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGH
HEEHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCC
NLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAWFGLQQAIMARQGHWRDTARK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
EALSQAAFWLNGAVR
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGY
EEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC
DGRYEMTVKTGGKVVGGLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLF
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHH
RTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIELELKQGTQGDLLALAAELAK
HCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHE
HCCCCHHHHHHHHCCCCCCCCCCCHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHH
ELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAAL
HHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCCHHH
LCYSVDYLKCKLALTSWLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGH
HEEHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCC
NLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAWFGLQQAIMARQGHWRDTARK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
EALSQAAFWLNGAVR
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]