| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218927802
Identifier: 218927802
GI number: 218927802
Start: 665167
End: 666546
Strand: Reverse
Name: 218927802
Synonym: YPO0608
Alternate gene names: NA
Gene position: 666546-665167 (Counterclockwise)
Preceding gene: 218927811
Following gene: 218927801
Centisome position: 14.32
GC content: 48.04
Gene sequence:
>1380_bases ATGATTAATAAAAGAAAAATTGTCCTCGCCGCTATATTACTCACGGTTAACGGCGGCTTGTTCGCCCAGAGCGTCGTGAT TGATCAATTAAAAGTTTCTGAGCATCTTTATCCAAAGGGATTTGAATCCGAATTTCAGAATAACCTCGATTTCTATCGTG ACGGTGTTGGTGTCGATGAGAAGGCCAAAGTGCCTTACGATACGATCCGTATTGAAGGTACTGAAATTGTTAAAGGTTAT TATACCAACACCACCGAGGTGGGGTTGTATCTCAATATATTAACCGAGTCGGTAAAAGCCGGTAACCTGCAGGCGTTACA ACGAATTAAAGAGACATTAACCACCTTGGAGCAGGCCCCCAAATGGAACGGGTTATTTTACTGGCCCTATGATATCCGCG ACGGCAAGCTGGTGACCAATCCCGATGAAATCGTACCTGCGGTGGATAACGGTAATCTCTCGTTCGCACTGGCGGGGGTT GCGGGTGCATTTCTAGATTCGAGCGATGCGGACAAGCAAGAGATCGTGCAACGCATTGAGGCGATACTGGACGGACAGAA ACCAGGCTGGGCCGCCCTGTACGATGAAAATAAAGGTCTGCTCTCCTCTGGTTGGTCGACAAAAAACAATGCGTCACTGG GCTACTTCGTTGATCGCAAGGGCAATGAAAGCCGTGCGGCGGTGGCCTGGGCGGTGCTGGCGACTAAAGATATGGGAGCC AAAGCATTACCGGTTAGCGCGTTCAGTAAAATGGAGCTCTACACCCAACGCTATGAAATAAACGGCAAGCAATACAACCC GCTGCTGACCTGGGATGGCGCTTATTTCCAGATGATGATGCCGCAAATATGGCTGAATGAGCGTGAACTGATGCCTAACT ACGGCATTGTCGAGGATCACACCTTTATTCAAAAAGTCTATGCCAGCAAGCATGGCATTCCAATGGTTTCTTCCTCCGCT ACCACGGATAACGCTTACCACGCCTTCGGTGTGCCACAGCTTTCCGAGAGCAAAGTTCGCTTCAAGAATAAGATCGATGA TGGCTATACCGGTACGCCGCACGCAATAGCGCTCTCCTATATCGTCGATCCTGCCGGAGCGATCAGCGCATTAAAGAAAC TGAAACAGGCTTATCCGAATATCGAATCCCCGTATGGCTGGTATGACGCTGTCGATAGCAGCGGCAAGATCTCAAAAAAT ATCCTTTCCCTTGATGTCGGCATGTTTGTTGGTGCTTTTCTGGCGAAAGAGATCAATGCCGATGTTGAAAAATACCTACA AAGCAAGGGCGATATGGAATTGCTAAAAGAGATGTATCAGTCCTACGTTCCCAATAATTACAAACCATTGGATGGTCTCT CCAGCTCTTCTCTGCACTGA
Upstream 100 bases:
>100_bases CTGTTAATGCGGTTGACTCACGTTGTTTATTACGCAGATTATAGAAACGTTTCTATTGAATGGTTTTTAACCTAAAGTCA GGCTTATAAGGCATATTTAC
Downstream 100 bases:
>100_bases TGACTACCGACACCCAATTACCCTAATACCACCTCTCGGTTCACCAGAGCAGAGGATGGCATTGCCCCCCATTTCGCGAT GATAGAATAAGGATTACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MINKRKIVLAAILLTVNGGLFAQSVVIDQLKVSEHLYPKGFESEFQNNLDFYRDGVGVDEKAKVPYDTIRIEGTEIVKGY YTNTTEVGLYLNILTESVKAGNLQALQRIKETLTTLEQAPKWNGLFYWPYDIRDGKLVTNPDEIVPAVDNGNLSFALAGV AGAFLDSSDADKQEIVQRIEAILDGQKPGWAALYDENKGLLSSGWSTKNNASLGYFVDRKGNESRAAVAWAVLATKDMGA KALPVSAFSKMELYTQRYEINGKQYNPLLTWDGAYFQMMMPQIWLNERELMPNYGIVEDHTFIQKVYASKHGIPMVSSSA TTDNAYHAFGVPQLSESKVRFKNKIDDGYTGTPHAIALSYIVDPAGAISALKKLKQAYPNIESPYGWYDAVDSSGKISKN ILSLDVGMFVGAFLAKEINADVEKYLQSKGDMELLKEMYQSYVPNNYKPLDGLSSSSLH
Sequences:
>Translated_459_residues MINKRKIVLAAILLTVNGGLFAQSVVIDQLKVSEHLYPKGFESEFQNNLDFYRDGVGVDEKAKVPYDTIRIEGTEIVKGY YTNTTEVGLYLNILTESVKAGNLQALQRIKETLTTLEQAPKWNGLFYWPYDIRDGKLVTNPDEIVPAVDNGNLSFALAGV AGAFLDSSDADKQEIVQRIEAILDGQKPGWAALYDENKGLLSSGWSTKNNASLGYFVDRKGNESRAAVAWAVLATKDMGA KALPVSAFSKMELYTQRYEINGKQYNPLLTWDGAYFQMMMPQIWLNERELMPNYGIVEDHTFIQKVYASKHGIPMVSSSA TTDNAYHAFGVPQLSESKVRFKNKIDDGYTGTPHAIALSYIVDPAGAISALKKLKQAYPNIESPYGWYDAVDSSGKISKN ILSLDVGMFVGAFLAKEINADVEKYLQSKGDMELLKEMYQSYVPNNYKPLDGLSSSSLH >Mature_459_residues MINKRKIVLAAILLTVNGGLFAQSVVIDQLKVSEHLYPKGFESEFQNNLDFYRDGVGVDEKAKVPYDTIRIEGTEIVKGY YTNTTEVGLYLNILTESVKAGNLQALQRIKETLTTLEQAPKWNGLFYWPYDIRDGKLVTNPDEIVPAVDNGNLSFALAGV AGAFLDSSDADKQEIVQRIEAILDGQKPGWAALYDENKGLLSSGWSTKNNASLGYFVDRKGNESRAAVAWAVLATKDMGA KALPVSAFSKMELYTQRYEINGKQYNPLLTWDGAYFQMMMPQIWLNERELMPNYGIVEDHTFIQKVYASKHGIPMVSSSA TTDNAYHAFGVPQLSESKVRFKNKIDDGYTGTPHAIALSYIVDPAGAISALKKLKQAYPNIESPYGWYDAVDSSGKISKN ILSLDVGMFVGAFLAKEINADVEKYLQSKGDMELLKEMYQSYVPNNYKPLDGLSSSSLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50969; Mature: 50969
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKRKIVLAAILLTVNGGLFAQSVVIDQLKVSEHLYPKGFESEFQNNLDFYRDGVGVDE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCC KAKVPYDTIRIEGTEIVKGYYTNTTEVGLYLNILTESVKAGNLQALQRIKETLTTLEQAP CCCCCCEEEEECCEEEEEEEECCCCCHHEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHCC KWNGLFYWPYDIRDGKLVTNPDEIVPAVDNGNLSFALAGVAGAFLDSSDADKQEIVQRIE CCCCEEEEEEECCCCEEECCHHHHEEEECCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHH AILDGQKPGWAALYDENKGLLSSGWSTKNNASLGYFVDRKGNESRAAVAWAVLATKDMGA HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHEEEEEEEHHCCCC KALPVSAFSKMELYTQRYEINGKQYNPLLTWDGAYFQMMMPQIWLNERELMPNYGIVEDH CCCCHHHHHHHHHHHHHHCCCCCEECCEEEECCHHHHHHHHHHHCCCHHCCCCCCCCCCH TFIQKVYASKHGIPMVSSSATTDNAYHAFGVPQLSESKVRFKNKIDDGYTGTPHAIALSY HHHHHHHHHCCCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCHHEEEEE IVDPAGAISALKKLKQAYPNIESPYGWYDAVDSSGKISKNILSLDVGMFVGAFLAKEINA HCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH DVEKYLQSKGDMELLKEMYQSYVPNNYKPLDGLSSSSLH HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MINKRKIVLAAILLTVNGGLFAQSVVIDQLKVSEHLYPKGFESEFQNNLDFYRDGVGVDE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCC KAKVPYDTIRIEGTEIVKGYYTNTTEVGLYLNILTESVKAGNLQALQRIKETLTTLEQAP CCCCCCEEEEECCEEEEEEEECCCCCHHEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHCC KWNGLFYWPYDIRDGKLVTNPDEIVPAVDNGNLSFALAGVAGAFLDSSDADKQEIVQRIE CCCCEEEEEEECCCCEEECCHHHHEEEECCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHH AILDGQKPGWAALYDENKGLLSSGWSTKNNASLGYFVDRKGNESRAAVAWAVLATKDMGA HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHEEEEEEEHHCCCC KALPVSAFSKMELYTQRYEINGKQYNPLLTWDGAYFQMMMPQIWLNERELMPNYGIVEDH CCCCHHHHHHHHHHHHHHCCCCCEECCEEEECCHHHHHHHHHHHCCCHHCCCCCCCCCCH TFIQKVYASKHGIPMVSSSATTDNAYHAFGVPQLSESKVRFKNKIDDGYTGTPHAIALSY HHHHHHHHHCCCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCHHEEEEE IVDPAGAISALKKLKQAYPNIESPYGWYDAVDSSGKISKNILSLDVGMFVGAFLAKEINA HCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH DVEKYLQSKGDMELLKEMYQSYVPNNYKPLDGLSSSSLH HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA